Atomistry » Iron » PDB 3rmz-3s66 » 3s2r
Atomistry »
  Iron »
    PDB 3rmz-3s66 »
      3s2r »

Iron in PDB 3s2r: Atchloroneet (H87C Mutant)

Protein crystallography data

The structure of Atchloroneet (H87C Mutant), PDB code: 3s2r was solved by O.Livnah, Y.Eisenberg-Domovich, R.Nechushtai, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.42 / 1.14
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 33.290, 54.105, 72.682, 90.00, 90.00, 90.00
R / Rfree (%) 18.6 / 19.9

Iron Binding Sites:

The binding sites of Iron atom in the Atchloroneet (H87C Mutant) (pdb code 3s2r). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Atchloroneet (H87C Mutant), PDB code: 3s2r:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in 3s2r

Go back to Iron Binding Sites List in 3s2r
Iron binding site 1 out of 4 in the Atchloroneet (H87C Mutant)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Atchloroneet (H87C Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe500

b:15.4
occ:1.00
FE1 A:FES500 0.0 15.4 1.0
S1 A:FES500 2.2 16.8 1.0
S2 A:FES500 2.2 15.2 1.0
SG A:CYS76 2.3 11.8 1.0
SG A:CYS74 2.4 11.4 1.0
FE2 A:FES500 2.7 15.7 1.0
CB A:CYS76 3.3 12.0 1.0
CB A:CYS74 3.4 11.5 1.0
N A:CYS76 3.5 11.9 1.0
CA A:CYS74 3.7 11.4 1.0
CA A:CYS76 3.9 11.7 1.0
N A:ARG75 3.9 10.7 1.0
CB A:CYS89 4.0 12.2 1.0
N A:CYS89 4.2 12.4 1.0
C A:CYS74 4.3 11.4 1.0
SG A:CYS89 4.3 12.6 1.0
CB A:SER79 4.4 12.3 1.0
N A:TRP77 4.4 11.6 1.0
N A:SER79 4.4 12.4 1.0
C A:CYS76 4.5 11.3 1.0
CA A:CYS89 4.5 11.6 1.0
SG A:CYS85 4.6 12.3 1.0
N A:ARG78 4.6 12.6 1.0
C A:ARG75 4.7 11.7 1.0
CB A:CYS85 4.7 12.2 1.0
CA A:CYS85 4.7 12.2 1.0
CA A:SER79 4.8 12.7 1.0
CA A:ARG75 5.0 11.2 1.0
N A:CYS74 5.0 10.2 1.0

Iron binding site 2 out of 4 in 3s2r

Go back to Iron Binding Sites List in 3s2r
Iron binding site 2 out of 4 in the Atchloroneet (H87C Mutant)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Atchloroneet (H87C Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe500

b:15.7
occ:1.00
FE2 A:FES500 0.0 15.7 1.0
S2 A:FES500 2.3 15.2 1.0
S1 A:FES500 2.3 16.8 1.0
SG A:CYS85 2.3 12.3 1.0
SG A:CYS89 2.4 12.6 1.0
FE1 A:FES500 2.7 15.4 1.0
CB A:CYS89 3.2 12.2 1.0
CB A:CYS85 3.3 12.2 1.0
N A:CYS89 3.9 12.4 1.0
CA A:CYS85 3.9 12.2 1.0
N A:GLY87 4.0 13.3 1.0
CA A:CYS89 4.2 11.6 1.0
CD A:PRO102 4.2 12.6 1.0
CA A:GLY87 4.2 14.1 1.0
N A:ASP86 4.3 13.0 1.0
CB A:PRO102 4.4 11.8 1.0
SG A:CYS76 4.4 11.8 1.0
N A:SER88 4.4 12.3 1.0
C A:CYS85 4.4 12.2 1.0
CG A:PRO102 4.5 13.0 1.0
C A:GLY87 4.6 13.4 1.0
N A:PRO102 4.7 11.6 1.0
SG A:CYS74 4.7 11.4 1.0
CA A:CYS74 4.7 11.4 1.0
CB A:CYS74 4.9 11.5 1.0
CA A:PRO102 5.0 11.6 1.0

Iron binding site 3 out of 4 in 3s2r

Go back to Iron Binding Sites List in 3s2r
Iron binding site 3 out of 4 in the Atchloroneet (H87C Mutant)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Atchloroneet (H87C Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe500

b:15.7
occ:1.00
FE1 B:FES500 0.0 15.7 1.0
S1 B:FES500 2.2 16.7 1.0
S2 B:FES500 2.2 14.8 1.0
SG B:CYS76 2.3 12.8 1.0
SG B:CYS74 2.3 11.1 1.0
FE2 B:FES500 2.7 15.6 1.0
CB B:CYS76 3.3 13.1 1.0
CB B:CYS74 3.4 11.6 1.0
N B:CYS76 3.5 12.5 1.0
CA B:CYS74 3.7 10.9 1.0
CA B:CYS76 3.9 12.4 1.0
N B:ARG75 3.9 10.6 1.0
CB B:CYS89 4.0 13.1 1.0
N B:CYS89 4.2 13.3 1.0
C B:CYS74 4.3 10.4 1.0
SG B:CYS89 4.3 13.2 1.0
CB B:SER79 4.3 12.0 1.0
N B:SER79 4.4 12.4 1.0
C B:CYS76 4.5 11.7 1.0
N B:TRP77 4.5 11.4 1.0
CA B:CYS89 4.5 13.3 1.0
C B:ARG75 4.6 11.9 1.0
SG B:CYS85 4.7 11.7 1.0
CA B:CYS85 4.7 11.4 1.0
N B:ARG78 4.7 11.7 1.0
CB B:CYS85 4.8 12.1 1.0
CA B:SER79 4.8 12.2 1.0
CA B:ARG75 4.9 11.0 1.0
N B:CYS74 5.0 9.6 1.0

Iron binding site 4 out of 4 in 3s2r

Go back to Iron Binding Sites List in 3s2r
Iron binding site 4 out of 4 in the Atchloroneet (H87C Mutant)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Atchloroneet (H87C Mutant) within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe500

b:15.6
occ:1.00
FE2 B:FES500 0.0 15.6 1.0
S1 B:FES500 2.2 16.7 1.0
S2 B:FES500 2.3 14.8 1.0
SG B:CYS85 2.3 11.7 1.0
SG B:CYS89 2.4 13.2 1.0
FE1 B:FES500 2.7 15.7 1.0
CB B:CYS89 3.3 13.1 1.0
CB B:CYS85 3.3 12.1 1.0
CA B:CYS85 3.8 11.4 1.0
N B:CYS89 3.9 13.3 1.0
N B:GLY87 4.0 12.2 1.0
CA B:CYS89 4.2 13.3 1.0
CD B:PRO102 4.2 5.1 1.0
N B:ASP86 4.3 11.8 1.0
CA B:GLY87 4.3 12.5 1.0
C B:CYS85 4.4 12.4 1.0
SG B:CYS76 4.4 12.8 1.0
CB B:PRO102 4.4 4.2 1.0
N B:SER88 4.4 12.8 1.0
CG B:PRO102 4.6 4.1 1.0
C B:GLY87 4.6 11.9 1.0
SG B:CYS74 4.7 11.1 1.0
N B:PRO102 4.7 4.4 1.0
CA B:CYS74 4.8 10.9 1.0
CB B:CYS74 4.9 11.6 1.0
CA B:PRO102 4.9 4.2 1.0
C B:SER88 5.0 13.6 1.0

Reference:

R.Nechushtai, A.R.Conlan, L.Song, Y.Harir, O.Yogev, Y.Eisenberg-Domovich, O.Livnah, D.Michaeli, R.Rosen, V.Ma, Y.Luo, J.A.Zuris, V.Shulaev, M.L.Paddock, Z.Y.Cabantchik, P.A.Jennings, R.Mittler. Arabidopsis Thaliana Chloroneet, A Member of the New Neet Family of Human Proteins, Is Involved in Development, Senescence and Iron Metabolism. To Be Published.
Page generated: Sun Aug 4 19:47:19 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy