Atomistry » Iron » PDB 3s6b-3sxt » 3sdh
Atomistry »
  Iron »
    PDB 3s6b-3sxt »
      3sdh »

Iron in PDB 3sdh: High Resolution Crystallographic Analysis of A Cooperative Dimeric Hemoglobin

Protein crystallography data

The structure of High Resolution Crystallographic Analysis of A Cooperative Dimeric Hemoglobin, PDB code: 3sdh was solved by W.E.Royerjunior, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.40
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 93.250, 43.980, 83.500, 90.00, 122.03, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the High Resolution Crystallographic Analysis of A Cooperative Dimeric Hemoglobin (pdb code 3sdh). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the High Resolution Crystallographic Analysis of A Cooperative Dimeric Hemoglobin, PDB code: 3sdh:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3sdh

Go back to Iron Binding Sites List in 3sdh
Iron binding site 1 out of 2 in the High Resolution Crystallographic Analysis of A Cooperative Dimeric Hemoglobin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of High Resolution Crystallographic Analysis of A Cooperative Dimeric Hemoglobin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe147

b:14.5
occ:1.00
FE A:HEM147 0.0 14.5 1.0
C A:CMO501 1.8 14.8 1.0
NC A:HEM147 2.0 14.9 1.0
NB A:HEM147 2.0 14.4 1.0
NA A:HEM147 2.0 14.2 1.0
ND A:HEM147 2.0 14.7 1.0
NE2 A:HIS101 2.1 14.5 1.0
O A:CMO501 2.9 14.0 1.0
C4C A:HEM147 3.0 15.6 1.0
C4B A:HEM147 3.0 14.6 1.0
C1C A:HEM147 3.0 14.7 1.0
CE1 A:HIS101 3.0 14.2 1.0
C1A A:HEM147 3.0 14.8 1.0
C1B A:HEM147 3.0 14.8 1.0
C4D A:HEM147 3.0 15.7 1.0
C4A A:HEM147 3.1 14.4 1.0
C1D A:HEM147 3.1 16.0 1.0
CD2 A:HIS101 3.1 14.4 1.0
CHA A:HEM147 3.4 15.5 1.0
CHC A:HEM147 3.4 14.9 1.0
CHD A:HEM147 3.4 15.4 1.0
CHB A:HEM147 3.4 14.4 1.0
ND1 A:HIS101 4.2 14.9 1.0
CG A:HIS101 4.2 14.5 1.0
C2C A:HEM147 4.2 15.4 1.0
C3C A:HEM147 4.2 15.7 1.0
C3B A:HEM147 4.3 15.5 1.0
C2B A:HEM147 4.3 14.9 1.0
C2A A:HEM147 4.3 15.0 1.0
C3D A:HEM147 4.3 16.2 1.0
C3A A:HEM147 4.3 14.7 1.0
C2D A:HEM147 4.3 16.2 1.0
CE1 A:HIS69 4.7 17.9 1.0
CD1 A:LEU73 4.7 20.9 1.0
CE1 A:PHE111 4.9 18.1 1.0

Iron binding site 2 out of 2 in 3sdh

Go back to Iron Binding Sites List in 3sdh
Iron binding site 2 out of 2 in the High Resolution Crystallographic Analysis of A Cooperative Dimeric Hemoglobin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of High Resolution Crystallographic Analysis of A Cooperative Dimeric Hemoglobin within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe147

b:14.2
occ:1.00
FE B:HEM147 0.0 14.2 1.0
C B:CMO501 1.8 15.3 1.0
NB B:HEM147 2.0 15.4 1.0
NA B:HEM147 2.0 14.1 1.0
NC B:HEM147 2.0 14.9 1.0
ND B:HEM147 2.0 15.3 1.0
NE2 B:HIS101 2.1 14.7 1.0
O B:CMO501 2.9 15.0 1.0
C1B B:HEM147 3.0 15.5 1.0
C4B B:HEM147 3.0 15.8 1.0
C4C B:HEM147 3.0 15.4 1.0
CE1 B:HIS101 3.0 16.0 1.0
C4D B:HEM147 3.0 15.4 1.0
C4A B:HEM147 3.0 14.9 1.0
C1A B:HEM147 3.0 15.0 1.0
C1C B:HEM147 3.1 15.6 1.0
C1D B:HEM147 3.1 15.6 1.0
CD2 B:HIS101 3.1 14.3 1.0
CHB B:HEM147 3.4 15.7 1.0
CHA B:HEM147 3.4 15.2 1.0
CHD B:HEM147 3.4 15.2 1.0
CHC B:HEM147 3.5 15.5 1.0
ND1 B:HIS101 4.2 14.7 1.0
CG B:HIS101 4.2 14.5 1.0
C3D B:HEM147 4.3 15.9 1.0
C2B B:HEM147 4.3 15.6 1.0
C3B B:HEM147 4.3 15.8 1.0
C2A B:HEM147 4.3 15.3 1.0
C2D B:HEM147 4.3 15.7 1.0
C3A B:HEM147 4.3 15.8 1.0
C3C B:HEM147 4.3 15.6 1.0
C2C B:HEM147 4.3 15.3 1.0
CD1 B:LEU73 4.7 19.4 1.0
CE1 B:HIS69 4.8 16.4 1.0
CE2 B:PHE111 4.9 15.7 1.0

Reference:

W.E.Royer Jr., W.E.Royerjunior. N/A N/A.
ISSN: ISSN 0022-2836
PubMed: 8289287
DOI: 10.1006/JMBI.1994.1019
Page generated: Sun Aug 4 19:54:31 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy