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Iron in PDB 3tjt: Crystal Structure Analysis of the Superoxide Dismutase From Clostridium Difficile

Enzymatic activity of Crystal Structure Analysis of the Superoxide Dismutase From Clostridium Difficile

All present enzymatic activity of Crystal Structure Analysis of the Superoxide Dismutase From Clostridium Difficile:
1.15.1.1;

Protein crystallography data

The structure of Crystal Structure Analysis of the Superoxide Dismutase From Clostridium Difficile, PDB code: 3tjt was solved by W.Li, C.Lei, T.L.Ying, H.F.Wang, X.S.Tan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.79 / 1.80
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 80.399, 80.399, 251.631, 90.00, 90.00, 120.00
R / Rfree (%) 18 / 20.3

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure Analysis of the Superoxide Dismutase From Clostridium Difficile (pdb code 3tjt). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure Analysis of the Superoxide Dismutase From Clostridium Difficile, PDB code: 3tjt:

Iron binding site 1 out of 1 in 3tjt

Go back to Iron Binding Sites List in 3tjt
Iron binding site 1 out of 1 in the Crystal Structure Analysis of the Superoxide Dismutase From Clostridium Difficile


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure Analysis of the Superoxide Dismutase From Clostridium Difficile within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe1

b:25.2
occ:1.00
OD2 A:ASP193 1.9 16.7 1.0
NE2 A:HIS56 2.2 16.1 1.0
NE2 A:HIS197 2.2 18.0 1.0
O A:HOH4 2.2 16.4 1.0
NE2 A:HIS111 2.2 19.7 1.0
CG A:ASP193 3.0 16.3 1.0
CD2 A:HIS56 3.1 18.4 1.0
CD2 A:HIS197 3.1 21.6 1.0
CE1 A:HIS111 3.2 19.5 1.0
CE1 A:HIS56 3.2 17.8 1.0
CD2 A:HIS111 3.2 19.1 1.0
CE1 A:HIS197 3.2 18.7 1.0
OD1 A:ASP193 3.5 16.2 1.0
CG A:HIS56 4.2 15.8 1.0
ND1 A:HIS56 4.2 14.8 1.0
ND1 A:HIS111 4.3 17.1 1.0
CG A:HIS197 4.3 16.4 1.0
CB A:ASP193 4.3 15.5 1.0
ND1 A:HIS197 4.3 18.0 1.0
CG A:HIS111 4.3 17.3 1.0
CZ2 A:TRP159 4.5 15.6 1.0
CB A:TRP195 4.6 14.1 1.0
NE2 A:GLN178 4.7 12.5 1.0
CG A:TRP195 4.8 16.6 1.0
CB A:ALA198 4.9 16.1 1.0
CH2 A:TRP159 4.9 18.1 1.0

Reference:

W.Li, C.Lei, T.L.Ying, H.F.Wang, X.S.Tan. Crystal Structure of the Superoxide Dismutase From Clostridium Difficile To Be Published.
Page generated: Sun Dec 13 15:22:13 2020

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