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Iron in PDB 3uhs: Hbi (L36M) Deoxy

Protein crystallography data

The structure of Hbi (L36M) Deoxy, PDB code: 3uhs was solved by Z.Ren, V.Srajer, J.E.Knapp, W.E.Royer Jr., with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 38.53 / 2.10
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 91.910, 44.410, 143.930, 90.00, 90.00, 90.00
R / Rfree (%) 18.8 / 22

Iron Binding Sites:

The binding sites of Iron atom in the Hbi (L36M) Deoxy (pdb code 3uhs). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Hbi (L36M) Deoxy, PDB code: 3uhs:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3uhs

Go back to Iron Binding Sites List in 3uhs
Iron binding site 1 out of 2 in the Hbi (L36M) Deoxy


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Hbi (L36M) Deoxy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe147

b:20.9
occ:1.00
FE A:HEM147 0.0 20.9 1.0
ND A:HEM147 2.0 18.4 1.0
NC A:HEM147 2.0 18.6 1.0
NB A:HEM147 2.0 20.3 1.0
NA A:HEM147 2.0 19.2 1.0
NE2 A:HIS101 2.1 22.9 1.0
CE1 A:HIS101 3.0 24.4 1.0
C1D A:HEM147 3.0 18.7 1.0
C4C A:HEM147 3.1 19.8 1.0
C1C A:HEM147 3.1 17.6 1.0
C4A A:HEM147 3.1 19.2 1.0
C1B A:HEM147 3.1 20.7 1.0
C4D A:HEM147 3.1 17.7 1.0
C1A A:HEM147 3.1 15.7 1.0
C4B A:HEM147 3.1 17.9 1.0
CD2 A:HIS101 3.1 24.6 1.0
CHD A:HEM147 3.4 17.9 1.0
CHC A:HEM147 3.4 17.7 1.0
CHB A:HEM147 3.4 18.1 1.0
CHA A:HEM147 3.5 14.5 1.0
O A:HOH166 3.5 32.0 1.0
ND1 A:HIS101 4.2 25.5 1.0
CG A:HIS101 4.3 24.8 1.0
C2D A:HEM147 4.3 19.0 1.0
C3D A:HEM147 4.3 19.1 1.0
C3A A:HEM147 4.3 16.2 1.0
C2C A:HEM147 4.3 18.4 1.0
C2B A:HEM147 4.3 21.3 1.0
C3C A:HEM147 4.3 18.4 1.0
C2A A:HEM147 4.3 19.8 1.0
C3B A:HEM147 4.3 18.6 1.0
CE1 A:HIS69 4.5 20.7 1.0
CZ A:PHE97 4.8 23.8 1.0
NE2 A:HIS69 4.9 19.6 1.0

Iron binding site 2 out of 2 in 3uhs

Go back to Iron Binding Sites List in 3uhs
Iron binding site 2 out of 2 in the Hbi (L36M) Deoxy


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Hbi (L36M) Deoxy within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe147

b:20.5
occ:1.00
FE B:HEM147 0.0 20.5 1.0
ND B:HEM147 2.0 19.9 1.0
NA B:HEM147 2.0 17.2 1.0
NC B:HEM147 2.0 14.5 1.0
NE2 B:HIS101 2.0 17.7 1.0
NB B:HEM147 2.0 15.3 1.0
CE1 B:HIS101 3.0 23.1 1.0
C1D B:HEM147 3.0 22.9 1.0
C1A B:HEM147 3.1 19.3 1.0
C4D B:HEM147 3.1 20.4 1.0
C4C B:HEM147 3.1 21.2 1.0
C4A B:HEM147 3.1 18.8 1.0
C1C B:HEM147 3.1 20.0 1.0
CD2 B:HIS101 3.1 18.9 1.0
C4B B:HEM147 3.1 19.6 1.0
C1B B:HEM147 3.1 18.6 1.0
CHD B:HEM147 3.4 22.9 1.0
CHC B:HEM147 3.5 18.1 1.0
CHA B:HEM147 3.5 19.6 1.0
CHB B:HEM147 3.5 19.0 1.0
O B:HOH150 3.6 27.0 1.0
ND1 B:HIS101 4.2 21.1 1.0
CG B:HIS101 4.2 22.2 1.0
C3A B:HEM147 4.3 15.6 1.0
C2A B:HEM147 4.3 17.4 1.0
C2D B:HEM147 4.3 26.7 1.0
C3D B:HEM147 4.3 23.4 1.0
C2C B:HEM147 4.3 21.7 1.0
C3C B:HEM147 4.3 20.7 1.0
C2B B:HEM147 4.3 16.4 1.0
C3B B:HEM147 4.3 17.0 1.0
CE1 B:HIS69 4.5 16.1 1.0
CZ B:PHE97 4.7 23.7 1.0
NH1 B:ARG104 4.9 33.0 1.0
NE2 B:HIS69 5.0 20.8 1.0

Reference:

Z.Ren, V.Srajer, J.E.Knapp, W.E.Royer. Cooperative Macromolecular Device Revealed By Meta-Analysis of Static and Time-Resolved Structures. Proc.Natl.Acad.Sci.Usa V. 109 107 2012.
ISSN: ISSN 0027-8424
PubMed: 22171006
DOI: 10.1073/PNAS.1109213108
Page generated: Sun Aug 4 21:11:59 2024

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