Iron in PDB 3uhy: Hbi (R104K) Deoxy

The structure of Hbi (R104K) Deoxy, PDB code: 3uhy was solved by Z.Ren, V.Srajer, J.E.Knapp, W.E.Royer Jr., with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	33.21 / 2.20
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	92.060, 44.440, 143.900, 90.00, 90.00, 90.00
R / Rfree (%)	17.4 / 20.7

The binding sites of Iron atom in the Hbi (R104K) Deoxy (pdb code 3uhy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Hbi (R104K) Deoxy, PDB code: 3uhy:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Hbi (R104K) Deoxy


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Hbi (R104K) Deoxy within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe147 b:18.0 occ:1.00 FE A:HEM147 0.0 18.0 1.0 NC A:HEM147 2.0 16.9 1.0 NB A:HEM147 2.0 17.5 1.0 ND A:HEM147 2.0 17.6 1.0 NA A:HEM147 2.1 16.9 1.0 NE2 A:HIS101 2.1 20.1 1.0 CE1 A:HIS101 3.0 21.9 1.0 C4C A:HEM147 3.0 17.1 1.0 C1C A:HEM147 3.0 16.3 1.0 C1B A:HEM147 3.1 16.2 1.0 C4B A:HEM147 3.1 15.0 1.0 C1D A:HEM147 3.1 17.9 1.0 C4A A:HEM147 3.1 15.9 1.0 C4D A:HEM147 3.1 18.0 1.0 C1A A:HEM147 3.1 17.8 1.0 CD2 A:HIS101 3.2 19.0 1.0 O A:HOH152 3.2 24.0 1.0 CHD A:HEM147 3.4 17.5 1.0 CHC A:HEM147 3.4 16.0 1.0 CHB A:HEM147 3.4 14.9 1.0 CHA A:HEM147 3.5 17.6 1.0 ND1 A:HIS101 4.2 21.8 1.0 CG A:HIS101 4.3 20.5 1.0 C2C A:HEM147 4.3 16.2 1.0 C3C A:HEM147 4.3 17.0 1.0 C2B A:HEM147 4.3 15.8 1.0 C3B A:HEM147 4.3 14.9 1.0 C2D A:HEM147 4.3 19.4 1.0 C3A A:HEM147 4.3 16.1 1.0 C3D A:HEM147 4.3 20.6 1.0 C2A A:HEM147 4.4 18.3 1.0 CE1 A:HIS69 4.6 15.1 1.0 CZ A:PHE97 4.8 18.0 1.0 CE1 A:PHE111 5.0 16.3 1.0

Iron binding site 2 out of 2 in the Hbi (R104K) Deoxy


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Hbi (R104K) Deoxy within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe147 b:17.7 occ:1.00 FE B:HEM147 0.0 17.7 1.0 NC B:HEM147 2.0 14.6 1.0 ND B:HEM147 2.0 16.4 1.0 NA B:HEM147 2.0 15.3 1.0 NB B:HEM147 2.0 14.0 1.0 NE2 B:HIS101 2.1 17.3 1.0 CE1 B:HIS101 3.0 19.7 1.0 C4C B:HEM147 3.1 16.4 1.0 C1D B:HEM147 3.1 16.4 1.0 C1C B:HEM147 3.1 14.1 1.0 C4D B:HEM147 3.1 17.6 1.0 C4B B:HEM147 3.1 12.2 1.0 C4A B:HEM147 3.1 15.5 1.0 C1A B:HEM147 3.1 15.9 1.0 C1B B:HEM147 3.1 12.6 1.0 CD2 B:HIS101 3.1 18.5 1.0 CHD B:HEM147 3.4 15.9 1.0 O B:HOH153 3.4 21.7 1.0 CHC B:HEM147 3.4 13.2 1.0 CHB B:HEM147 3.5 12.8 1.0 CHA B:HEM147 3.5 17.1 1.0 ND1 B:HIS101 4.2 19.3 1.0 CG B:HIS101 4.3 19.0 1.0 C2C B:HEM147 4.3 15.1 1.0 C2D B:HEM147 4.3 18.6 1.0 C3C B:HEM147 4.3 15.4 1.0 C3A B:HEM147 4.3 15.7 1.0 C2A B:HEM147 4.3 16.7 1.0 C3D B:HEM147 4.3 19.6 1.0 C2B B:HEM147 4.3 12.6 1.0 C3B B:HEM147 4.3 12.0 1.0 CE1 B:HIS69 4.6 10.3 1.0 CZ B:PHE97 4.8 19.4 1.0 NE2 B:HIS69 5.0 11.7 1.0

Z.Ren, V.Srajer, J.E.Knapp, W.E.Royer. Cooperative Macromolecular Device Revealed By Meta-Analysis of Static and Time-Resolved Structures. Proc.Natl.Acad.Sci.Usa V. 109 107 2012.
ISSN: ISSN 0027-8424
PubMed: 22171006
DOI: 10.1073/PNAS.1109213108