Atomistry » Iron » PDB 3uhg-3v2z » 3ui0
Atomistry »
  Iron »
    PDB 3uhg-3v2z »
      3ui0 »

Iron in PDB 3ui0: Hbi (T72G) Deoxy

Protein crystallography data

The structure of Hbi (T72G) Deoxy, PDB code: 3ui0 was solved by Z.Ren, V.Srajer, J.E.Knapp, W.E.Royer Jr., with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.72 / 1.80
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 91.760, 44.430, 143.960, 90.00, 90.00, 90.00
R / Rfree (%) 17.8 / 19.9

Iron Binding Sites:

The binding sites of Iron atom in the Hbi (T72G) Deoxy (pdb code 3ui0). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Hbi (T72G) Deoxy, PDB code: 3ui0:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3ui0

Go back to Iron Binding Sites List in 3ui0
Iron binding site 1 out of 2 in the Hbi (T72G) Deoxy


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Hbi (T72G) Deoxy within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe147

b:14.9
occ:1.00
FE A:HEM147 0.0 14.9 1.0
NC A:HEM147 2.0 15.4 1.0
ND A:HEM147 2.0 15.1 1.0
NA A:HEM147 2.0 13.9 1.0
NB A:HEM147 2.0 15.1 1.0
NE2 A:HIS101 2.1 15.4 1.0
CE1 A:HIS101 3.0 16.7 1.0
C4C A:HEM147 3.1 16.0 1.0
C1D A:HEM147 3.1 15.3 1.0
C1B A:HEM147 3.1 13.7 1.0
C4A A:HEM147 3.1 13.3 1.0
C1A A:HEM147 3.1 12.0 1.0
C1C A:HEM147 3.1 15.6 1.0
C4D A:HEM147 3.1 15.4 1.0
C4B A:HEM147 3.1 14.3 1.0
CD2 A:HIS101 3.1 16.9 1.0
CHD A:HEM147 3.4 15.7 1.0
CHB A:HEM147 3.5 14.2 1.0
CHC A:HEM147 3.5 15.6 1.0
CHA A:HEM147 3.5 12.4 1.0
O A:HOH155 3.6 24.2 1.0
ND1 A:HIS101 4.2 17.0 1.0
CG A:HIS101 4.2 15.6 1.0
C3A A:HEM147 4.3 13.0 1.0
C2A A:HEM147 4.3 13.7 1.0
C2B A:HEM147 4.3 13.0 1.0
C2D A:HEM147 4.3 15.6 1.0
C2C A:HEM147 4.3 15.7 1.0
C3D A:HEM147 4.3 17.0 1.0
C3C A:HEM147 4.3 15.1 1.0
C3B A:HEM147 4.3 11.1 1.0
CE1 A:HIS69 4.5 15.3 1.0
CZ A:PHE97 4.7 18.8 1.0
NE2 A:HIS69 5.0 14.7 1.0

Iron binding site 2 out of 2 in 3ui0

Go back to Iron Binding Sites List in 3ui0
Iron binding site 2 out of 2 in the Hbi (T72G) Deoxy


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Hbi (T72G) Deoxy within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe147

b:13.1
occ:1.00
FE B:HEM147 0.0 13.1 1.0
NA B:HEM147 2.0 12.9 1.0
ND B:HEM147 2.0 13.7 1.0
NC B:HEM147 2.0 11.8 1.0
NB B:HEM147 2.0 10.3 1.0
NE2 B:HIS101 2.0 12.6 1.0
CE1 B:HIS101 3.0 15.6 1.0
C4C B:HEM147 3.0 13.6 1.0
C1D B:HEM147 3.0 14.6 1.0
C4A B:HEM147 3.1 12.2 1.0
C1A B:HEM147 3.1 12.3 1.0
C4D B:HEM147 3.1 11.9 1.0
C1C B:HEM147 3.1 11.4 1.0
C1B B:HEM147 3.1 12.2 1.0
CD2 B:HIS101 3.1 12.0 1.0
C4B B:HEM147 3.1 11.8 1.0
CHD B:HEM147 3.4 14.0 1.0
CHB B:HEM147 3.5 13.9 1.0
CHA B:HEM147 3.5 13.2 1.0
CHC B:HEM147 3.5 11.0 1.0
O B:HOH148 3.6 18.4 1.0
ND1 B:HIS101 4.2 14.5 1.0
CG B:HIS101 4.2 13.1 1.0
C3A B:HEM147 4.3 13.2 1.0
C2A B:HEM147 4.3 10.1 1.0
C2D B:HEM147 4.3 14.5 1.0
C3C B:HEM147 4.3 12.8 1.0
C2C B:HEM147 4.3 13.4 1.0
C3D B:HEM147 4.3 14.1 1.0
C2B B:HEM147 4.3 11.1 1.0
C3B B:HEM147 4.3 12.7 1.0
CE1 B:HIS69 4.4 13.2 1.0
CZ B:PHE97 4.7 15.5 1.0
NE2 B:HIS69 4.9 12.8 1.0

Reference:

Z.Ren, V.Srajer, J.E.Knapp, W.E.Royer. Cooperative Macromolecular Device Revealed By Meta-Analysis of Static and Time-Resolved Structures. Proc.Natl.Acad.Sci.Usa V. 109 107 2012.
ISSN: ISSN 0027-8424
PubMed: 22171006
DOI: 10.1073/PNAS.1109213108
Page generated: Sun Aug 4 21:14:50 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy