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Iron in PDB 3wrh: Crystal Structure of P450CAM

Enzymatic activity of Crystal Structure of P450CAM

All present enzymatic activity of Crystal Structure of P450CAM:
1.14.15.1;

Protein crystallography data

The structure of Crystal Structure of P450CAM, PDB code: 3wrh was solved by A.Kishimoto, K.Takagi, A.Amano, K.Sakurai, T.Mizushima, H.Shimada, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 32.01 / 1.62
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 66.994, 62.668, 96.038, 90.00, 90.79, 90.00
R / Rfree (%) 17.5 / 20.9

Other elements in 3wrh:

The structure of Crystal Structure of P450CAM also contains other interesting chemical elements:

Potassium (K) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of P450CAM (pdb code 3wrh). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of P450CAM, PDB code: 3wrh:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 3wrh

Go back to Iron Binding Sites List in 3wrh
Iron binding site 1 out of 2 in the Crystal Structure of P450CAM


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of P450CAM within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:6.2
occ:1.00
FE A:HEM501 0.0 6.2 1.0
NA A:HEM501 1.9 6.6 1.0
NC A:HEM501 2.0 6.4 1.0
ND A:HEM501 2.0 5.8 1.0
NB A:HEM501 2.0 6.2 1.0
SG A:CYS357 2.3 7.8 1.0
C4B A:HEM501 3.0 6.5 1.0
C4A A:HEM501 3.1 5.5 1.0
C1A A:HEM501 3.1 6.3 1.0
C1D A:HEM501 3.1 7.3 1.0
C4C A:HEM501 3.1 7.0 1.0
C1C A:HEM501 3.1 6.4 1.0
C1B A:HEM501 3.1 5.3 1.0
C4D A:HEM501 3.1 6.0 1.0
CB A:CYS357 3.4 7.0 1.0
CHC A:HEM501 3.5 7.0 1.0
CHA A:HEM501 3.5 5.9 1.0
CHB A:HEM501 3.5 6.1 1.0
CHD A:HEM501 3.5 7.5 1.0
C5 A:CAM503 4.0 10.2 1.0
CA A:CYS357 4.0 7.0 1.0
C3B A:HEM501 4.3 5.8 1.0
C3A A:HEM501 4.3 6.0 1.0
C3C A:HEM501 4.3 7.6 1.0
C2D A:HEM501 4.3 7.3 1.0
C2A A:HEM501 4.3 6.3 1.0
C2B A:HEM501 4.4 5.2 1.0
C3D A:HEM501 4.4 6.5 1.0
C2C A:HEM501 4.4 7.2 1.0
N A:GLY359 4.5 7.4 1.0
C4 A:CAM503 4.6 10.8 1.0
N A:LEU358 4.7 7.4 1.0
C A:CYS357 4.7 7.9 1.0
C9 A:CAM503 4.8 11.7 1.0
CA A:GLY359 4.8 8.5 1.0

Iron binding site 2 out of 2 in 3wrh

Go back to Iron Binding Sites List in 3wrh
Iron binding site 2 out of 2 in the Crystal Structure of P450CAM


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of P450CAM within 5.0Å range:
probe atom residue distance (Å) B Occ
E:Fe501

b:6.7
occ:1.00
FE E:HEM501 0.0 6.7 1.0
NA E:HEM501 2.0 6.0 1.0
NC E:HEM501 2.0 6.3 1.0
ND E:HEM501 2.0 5.7 1.0
NB E:HEM501 2.1 6.4 1.0
SG E:CYS357 2.3 8.7 1.0
C1D E:HEM501 3.0 6.5 1.0
C4A E:HEM501 3.1 5.8 1.0
C4B E:HEM501 3.1 7.3 1.0
C1C E:HEM501 3.1 6.4 1.0
C1B E:HEM501 3.1 6.2 1.0
C4C E:HEM501 3.1 6.2 1.0
C1A E:HEM501 3.1 6.0 1.0
C4D E:HEM501 3.1 6.0 1.0
CB E:CYS357 3.4 7.5 1.0
CHD E:HEM501 3.5 6.6 1.0
CHB E:HEM501 3.5 5.7 1.0
CHC E:HEM501 3.5 7.2 1.0
CHA E:HEM501 3.5 5.7 1.0
CA E:CYS357 4.0 7.1 1.0
C5 E:CAM503 4.1 12.7 1.0
C3B E:HEM501 4.3 6.4 1.0
C2D E:HEM501 4.3 6.8 1.0
C3A E:HEM501 4.3 5.8 1.0
C3C E:HEM501 4.4 7.3 1.0
C2A E:HEM501 4.4 6.3 1.0
C2C E:HEM501 4.4 7.1 1.0
C2B E:HEM501 4.4 6.4 1.0
C3D E:HEM501 4.4 6.8 1.0
N E:GLY359 4.4 7.8 1.0
C4 E:CAM503 4.6 12.1 1.0
N E:LEU358 4.6 7.5 1.0
C E:CYS357 4.7 8.6 1.0
C9 E:CAM503 4.8 10.9 1.0
CA E:GLY359 4.9 7.1 1.0

Reference:

A.Kishimoto, K.Takagi, A.Amano, K.Sakurai, Y.Katayama, R.Aminaka, M.Ito, T.Mizushima, H.Shimada. Structure of P450CAM Intermedite To Be Published.
Page generated: Sun Dec 13 15:26:09 2020

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