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Iron in PDB 3wui: Dimeric Horse Cytochrome C Formed By Refolding From Molten Globule State

Protein crystallography data

The structure of Dimeric Horse Cytochrome C Formed By Refolding From Molten Globule State, PDB code: 3wui was solved by M.S.Deshpande, P.P.Parui, H.Kamikubo, M.Yamanaka, S.Nagao, H.Komori, M.Kataoka, Y.Higuchi, S.Hirota, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 30.48 / 1.80
Space group C 2 2 21
Cell size a, b, c (Å), α, β, γ (°) 60.948, 94.145, 36.390, 90.00, 90.00, 90.00
R / Rfree (%) 18.1 / 22.7

Iron Binding Sites:

The binding sites of Iron atom in the Dimeric Horse Cytochrome C Formed By Refolding From Molten Globule State (pdb code 3wui). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Dimeric Horse Cytochrome C Formed By Refolding From Molten Globule State, PDB code: 3wui:

Iron binding site 1 out of 1 in 3wui

Go back to Iron Binding Sites List in 3wui
Iron binding site 1 out of 1 in the Dimeric Horse Cytochrome C Formed By Refolding From Molten Globule State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Dimeric Horse Cytochrome C Formed By Refolding From Molten Globule State within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:21.5
occ:1.00
FE A:HEM201 0.0 21.5 1.0
NB A:HEM201 1.9 21.0 1.0
NE2 A:HIS18 1.9 19.0 1.0
ND A:HEM201 2.0 22.5 1.0
O A:HOH315 2.0 27.9 1.0
NA A:HEM201 2.1 20.6 1.0
NC A:HEM201 2.1 19.7 1.0
CD2 A:HIS18 2.9 19.7 1.0
CE1 A:HIS18 3.0 21.8 1.0
C1B A:HEM201 3.0 22.2 1.0
C4B A:HEM201 3.0 21.5 1.0
C1D A:HEM201 3.0 23.3 1.0
C1C A:HEM201 3.0 18.9 1.0
C4D A:HEM201 3.0 21.0 1.0
C4C A:HEM201 3.1 19.6 1.0
C4A A:HEM201 3.1 20.3 1.0
C1A A:HEM201 3.1 20.5 1.0
CHB A:HEM201 3.4 21.0 1.0
CHD A:HEM201 3.4 23.6 1.0
CHC A:HEM201 3.4 18.6 1.0
CHA A:HEM201 3.4 18.1 1.0
ND1 A:HIS18 4.0 19.6 1.0
CG A:HIS18 4.1 21.7 1.0
C3B A:HEM201 4.2 21.6 1.0
C2B A:HEM201 4.2 20.7 1.0
O A:HOH343 4.3 33.2 1.0
C2C A:HEM201 4.3 19.8 1.0
C2D A:HEM201 4.3 20.2 1.0
C3D A:HEM201 4.3 19.0 1.0
C3A A:HEM201 4.3 19.0 1.0
C2A A:HEM201 4.3 19.4 1.0
C3C A:HEM201 4.3 17.4 1.0
OH A:TYR67 4.5 21.7 1.0
CE A:MET80 4.8 27.3 1.0

Reference:

M.S.Deshpande, P.P.Parui, H.Kamikubo, M.Yamanaka, S.Nagao, H.Komori, M.Kataoka, Y.Higuchi, S.Hirota. Formation of Domain-Swapped Oligomer of Cytochrome C From Its Molten Globule State Oligomer Biochemistry 2014.
ISSN: ISSN 0006-2960
PubMed: 24981551
DOI: 10.1021/BI500497S
Page generated: Sun Dec 13 15:26:24 2020

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