Iron in PDB 3zhw: X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications

The structure of X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications, PDB code: 3zhw was solved by N.Mukhi, S.Dhindwal, S.Uppal, P.Kumar, J.Kaur, S.Kundu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	46.94 / 2.22
Space group	P 21 21 21
Cell size a, b, c (Å), α, β, γ (°)	59.280, 76.672, 98.228, 90.00, 90.00, 90.00
R / Rfree (%)	21.435 / 26.23

The binding sites of Iron atom in the X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications (pdb code 3zhw). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications, PDB code: 3zhw:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1163 b:32.4 occ:1.00 FE A:HEM1163 0.0 32.4 1.0 NE2 A:HIS69 2.0 31.0 1.0 NE2 A:HIS104 2.1 30.2 1.0 NA A:HEM1163 2.1 37.4 1.0 NB A:HEM1163 2.1 35.3 1.0 ND A:HEM1163 2.1 34.9 1.0 NC A:HEM1163 2.1 36.3 1.0 CD2 A:HIS69 2.9 30.9 1.0 CE1 A:HIS104 3.0 31.6 1.0 C4B A:HEM1163 3.0 35.7 1.0 CE1 A:HIS69 3.0 30.3 1.0 C4D A:HEM1163 3.0 36.1 1.0 CD2 A:HIS104 3.0 29.8 1.0 C1B A:HEM1163 3.0 34.9 1.0 C1A A:HEM1163 3.0 35.7 1.0 C4A A:HEM1163 3.1 35.5 1.0 C1D A:HEM1163 3.1 36.1 1.0 C1C A:HEM1163 3.1 36.3 1.0 C4C A:HEM1163 3.1 36.2 1.0 CHA A:HEM1163 3.4 35.5 1.0 CHC A:HEM1163 3.4 35.4 1.0 CHB A:HEM1163 3.4 36.2 1.0 CHD A:HEM1163 3.5 36.0 1.0 CG A:HIS69 4.1 31.8 1.0 ND1 A:HIS104 4.1 31.2 1.0 ND1 A:HIS69 4.1 30.8 1.0 CG A:HIS104 4.1 30.9 1.0 C2A A:HEM1163 4.2 34.8 1.0 C2B A:HEM1163 4.2 35.1 1.0 C3A A:HEM1163 4.2 34.3 1.0 C3B A:HEM1163 4.3 35.0 1.0 C3D A:HEM1163 4.3 36.3 1.0 C2C A:HEM1163 4.3 35.9 1.0 C2D A:HEM1163 4.3 35.4 1.0 C3C A:HEM1163 4.3 36.0 1.0

Iron binding site 2 out of 2 in the X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe1163 b:35.9 occ:1.00 FE B:HEM1163 0.0 35.9 1.0 NA B:HEM1163 2.0 41.4 1.0 ND B:HEM1163 2.1 37.1 1.0 NE2 B:HIS69 2.1 37.6 1.0 NE2 B:HIS104 2.1 44.9 1.0 NB B:HEM1163 2.1 33.6 1.0 NC B:HEM1163 2.1 32.5 1.0 C4D B:HEM1163 3.0 37.6 1.0 CD2 B:HIS69 3.0 38.9 1.0 C1A B:HEM1163 3.0 41.4 1.0 C1D B:HEM1163 3.0 35.9 1.0 CD2 B:HIS104 3.0 45.7 1.0 CE1 B:HIS104 3.1 44.7 1.0 C4A B:HEM1163 3.1 40.0 1.0 CE1 B:HIS69 3.1 37.5 1.0 C1B B:HEM1163 3.1 36.0 1.0 C4C B:HEM1163 3.1 33.5 1.0 C4B B:HEM1163 3.1 35.5 1.0 C1C B:HEM1163 3.2 32.9 1.0 CHA B:HEM1163 3.4 37.8 1.0 CHD B:HEM1163 3.5 34.1 1.0 CHB B:HEM1163 3.5 37.9 1.0 CHC B:HEM1163 3.5 33.2 1.0 ND1 B:HIS104 4.1 45.5 1.0 CG B:HIS69 4.2 38.7 1.0 CG B:HIS104 4.2 44.0 1.0 ND1 B:HIS69 4.2 38.3 1.0 C2A B:HEM1163 4.2 42.1 1.0 C3A B:HEM1163 4.2 41.5 1.0 C3D B:HEM1163 4.3 38.1 1.0 C2D B:HEM1163 4.3 37.1 1.0 C3C B:HEM1163 4.3 32.1 1.0 C2B B:HEM1163 4.3 35.6 1.0 C2C B:HEM1163 4.3 32.8 1.0 C3B B:HEM1163 4.4 34.3 1.0

N.Mukhi, S.Dhindwal, S.Uppal, P.Kumar, J.Kaur, S.Kundu. X-Ray Crystallographic Structural Characteristics of Arabidopsis Hemoglobin I and Their Functional Implications Biochim.Biophys.Acta V.1834 1944 2013.
ISSN: ISSN 0006-3002
PubMed: 23485912
DOI: 10.1016/J.BBAPAP.2013.02.024