Iron in PDB 4au9: Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae

All present enzymatic activity of Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae:
1.11.1.19;

The structure of Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae, PDB code: 4au9 was solved by E.Strittmatter, M.Pecyna, R.Ullrich, M.Hofrichter, D.A.Plattner, C.Liers, K.Piontek, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	49.03 / 2.10
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	66.599, 46.689, 141.198, 90.00, 91.35, 90.00
R / Rfree (%)	17.966 / 26.088

The binding sites of Iron atom in the Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae (pdb code 4au9). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae, PDB code: 4au9:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe550 b:8.9 occ:1.00 FE A:HEM550 0.0 8.9 1.0 NA A:HEM550 2.0 9.7 1.0 ND A:HEM550 2.1 6.7 1.0 NC A:HEM550 2.1 7.7 1.0 NE2 A:HIS304 2.1 4.2 1.0 NB A:HEM550 2.1 8.2 1.0 CE1 A:HIS304 2.9 6.2 1.0 C1D A:HEM550 3.1 7.6 1.0 C4D A:HEM550 3.1 7.9 1.0 C1C A:HEM550 3.1 8.6 1.0 C1A A:HEM550 3.1 7.7 1.0 C4A A:HEM550 3.1 11.3 1.0 C4C A:HEM550 3.1 8.6 1.0 C4B A:HEM550 3.1 8.5 1.0 C1B A:HEM550 3.1 9.9 1.0 CD2 A:HIS304 3.3 6.0 1.0 CHA A:HEM550 3.4 9.0 1.0 CHC A:HEM550 3.4 4.6 1.0 CHD A:HEM550 3.4 7.2 1.0 CHB A:HEM550 3.5 8.6 1.0 ND1 A:HIS304 4.1 6.3 1.0 O A:HOH2162 4.2 35.8 1.0 C2D A:HEM550 4.3 5.3 1.0 CG A:HIS304 4.3 3.5 1.0 C3D A:HEM550 4.3 9.3 1.0 C2A A:HEM550 4.3 7.0 1.0 C3A A:HEM550 4.3 7.2 1.0 C2C A:HEM550 4.3 10.0 1.0 C3C A:HEM550 4.3 7.6 1.0 C2B A:HEM550 4.3 9.5 1.0 C3B A:HEM550 4.4 9.9 1.0 NH1 A:ARG332 4.4 5.6 1.0 OD2 A:ASP168 4.9 29.1 0.5 CD A:ARG332 5.0 12.7 1.0

Iron binding site 2 out of 2 in the Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of A Fungal Dyp-Type Peroxidase From Auricularia Auricula-Judae within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe550 b:20.4 occ:1.00 FE B:HEM550 0.0 20.4 1.0 NC B:HEM550 2.0 14.3 1.0 NA B:HEM550 2.0 17.7 1.0 ND B:HEM550 2.1 12.8 1.0 NB B:HEM550 2.1 15.4 1.0 NE2 B:HIS304 2.1 20.4 1.0 C4C B:HEM550 3.0 15.1 1.0 C4A B:HEM550 3.0 17.4 1.0 CD2 B:HIS304 3.0 22.1 1.0 C1C B:HEM550 3.1 13.6 1.0 C1D B:HEM550 3.1 15.6 1.0 C1B B:HEM550 3.1 18.2 1.0 C1A B:HEM550 3.1 18.7 1.0 O B:HOH2148 3.1 46.5 1.0 C4D B:HEM550 3.1 18.9 1.0 C4B B:HEM550 3.1 16.8 1.0 CE1 B:HIS304 3.1 24.0 1.0 CHD B:HEM550 3.4 14.6 1.0 CHB B:HEM550 3.4 17.9 1.0 CHC B:HEM550 3.5 16.3 1.0 CHA B:HEM550 3.5 15.0 1.0 CG B:HIS304 4.2 22.9 1.0 ND1 B:HIS304 4.2 24.0 1.0 C3C B:HEM550 4.2 12.6 1.0 C3A B:HEM550 4.2 20.0 1.0 C2C B:HEM550 4.3 11.8 1.0 C2A B:HEM550 4.3 19.7 1.0 NH1 B:ARG332 4.3 17.1 1.0 C2B B:HEM550 4.3 20.6 1.0 C2D B:HEM550 4.3 15.8 1.0 C3B B:HEM550 4.3 15.6 1.0 C3D B:HEM550 4.4 15.4 1.0 CD B:ARG332 4.8 17.1 1.0

E.Strittmatter, C.Liers, R.Ullrich, S.Wachter, M.Hofrichter, D.A.Plattner, K.Piontek. First Crystal Structure of A Fungal High-Redox Potential Dye-Decolorizing Peroxidase: Substrate Interaction Sites and Long-Range Electron Transfer. J.Biol.Chem. V. 288 4095 2013.
ISSN: ISSN 0021-9258
PubMed: 23235158
DOI: 10.1074/JBC.M112.400176