Iron »
PDB 4a9v-4b2y »
4ayb »
Iron in PDB 4ayb: Rnap at 3.2ANG
Enzymatic activity of Rnap at 3.2ANG
All present enzymatic activity of Rnap at 3.2ANG:
2.7.7.6;
2.7.7.6;
Protein crystallography data
The structure of Rnap at 3.2ANG, PDB code: 4ayb
was solved by
M.N.Wojtas,
M.Mogni,
O.Millet,
S.D.Bell,
N.G.A.Abrescia,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 40.10 / 3.20 |
| Space group | P 21 21 2 |
| Cell size a, b, c (Å), α, β, γ (°) | 195.725, 212.415, 128.757, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 24.3 / 30.1 |
Other elements in 4ayb:
The structure of Rnap at 3.2ANG also contains other interesting chemical elements:
| Magnesium | (Mg) | 1 atom |
| Zinc | (Zn) | 10 atoms |
Iron Binding Sites:
The binding sites of Iron atom in the Rnap at 3.2ANG
(pdb code 4ayb). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the Rnap at 3.2ANG, PDB code: 4ayb:
Jump to Iron binding site number: 1; 2; 3;
In total 3 binding sites of Iron where determined in the Rnap at 3.2ANG, PDB code: 4ayb:
Jump to Iron binding site number: 1; 2; 3;
Iron binding site 1 out of 3 in 4ayb
Go back to
Iron Binding Sites List in 4ayb
Iron binding site 1 out
of 3 in the Rnap at 3.2ANG
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Rnap at 3.2ANG within 5.0Å range:
|
Iron binding site 2 out of 3 in 4ayb
Go back to
Iron Binding Sites List in 4ayb
Iron binding site 2 out
of 3 in the Rnap at 3.2ANG
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Rnap at 3.2ANG within 5.0Å range:
|
Iron binding site 3 out of 3 in 4ayb
Go back to
Iron Binding Sites List in 4ayb
Iron binding site 3 out
of 3 in the Rnap at 3.2ANG
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Rnap at 3.2ANG within 5.0Å range:
|
Reference:
M.N.Wojtas,
M.Mogni,
O.Millet,
S.D.Bell,
N.G.A.Abrescia.
Structural and Functional Analyses of the Interaction of Archaeal Rna Polymerase with Dna. Nucleic Acids Res. V. 40 9941 2012.
ISSN: ISSN 0305-1048
PubMed: 22848102
DOI: 10.1093/NAR/GKS692
Page generated: Sun Aug 4 23:48:36 2024
ISSN: ISSN 0305-1048
PubMed: 22848102
DOI: 10.1093/NAR/GKS692
Last articles
Zn in 9JPJZn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
