Iron in PDB 4cat: Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution

Enzymatic activity of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution

All present enzymatic activity of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution:
1.11.1.6;

Protein crystallography data

The structure of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution, PDB code: 4cat was solved by B.K.Vainshtein, W.R.Melik-Adamyan, V.V.Barynin, A.A.Vagin, A.I.Grebenko, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 3.00
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 144.400, 144.400, 133.800, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution (pdb code 4cat). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution, PDB code: 4cat:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4cat

Go back to Iron Binding Sites List in 4cat
Iron binding site 1 out of 2 in the Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe660

b:0.0
occ:1.00
FE A:HEM660 0.0 0.0 1.0
ND A:HEM660 2.0 0.0 1.0
NC A:HEM660 2.0 0.0 1.0
NA A:HEM660 2.0 0.0 1.0
NB A:HEM660 2.1 0.0 1.0
C4D A:HEM660 3.0 0.0 1.0
C4C A:HEM660 3.0 0.0 1.0
C1D A:HEM660 3.0 0.0 1.0
C1A A:HEM660 3.0 0.0 1.0
C4A A:HEM660 3.0 0.0 1.0
C1C A:HEM660 3.1 0.0 1.0
C4B A:HEM660 3.1 0.0 1.0
C1B A:HEM660 3.1 0.0 1.0
CHD A:HEM660 3.4 0.0 1.0
CHA A:HEM660 3.4 0.0 1.0
CHB A:HEM660 3.4 0.0 1.0
CHC A:HEM660 3.4 0.0 1.0
C3D A:HEM660 4.2 0.0 1.0
C2D A:HEM660 4.2 0.0 1.0
C3C A:HEM660 4.3 0.0 1.0
C2A A:HEM660 4.3 0.0 1.0
C2C A:HEM660 4.3 0.0 1.0
C3A A:HEM660 4.3 0.0 1.0
C3B A:HEM660 4.3 0.0 1.0
C2B A:HEM660 4.3 0.0 1.0

Iron binding site 2 out of 2 in 4cat

Go back to Iron Binding Sites List in 4cat
Iron binding site 2 out of 2 in the Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe660

b:0.0
occ:1.00
FE B:HEM660 0.0 0.0 1.0
ND B:HEM660 2.0 0.0 1.0
NC B:HEM660 2.0 0.0 1.0
NA B:HEM660 2.0 0.0 1.0
NB B:HEM660 2.1 0.0 1.0
C4D B:HEM660 3.0 0.0 1.0
C4C B:HEM660 3.0 0.0 1.0
C1D B:HEM660 3.0 0.0 1.0
C1A B:HEM660 3.0 0.0 1.0
C4A B:HEM660 3.0 0.0 1.0
C1C B:HEM660 3.1 0.0 1.0
C4B B:HEM660 3.1 0.0 1.0
C1B B:HEM660 3.1 0.0 1.0
CHD B:HEM660 3.4 0.0 1.0
CHA B:HEM660 3.4 0.0 1.0
CHB B:HEM660 3.4 0.0 1.0
CHC B:HEM660 3.4 0.0 1.0
C3D B:HEM660 4.2 0.0 1.0
C2D B:HEM660 4.2 0.0 1.0
C3C B:HEM660 4.3 0.0 1.0
C2A B:HEM660 4.3 0.0 1.0
C2C B:HEM660 4.3 0.0 1.0
C3A B:HEM660 4.3 0.0 1.0
C3B B:HEM660 4.3 0.0 1.0
C2B B:HEM660 4.3 0.0 1.0

Reference:

B.K.Vainshtein, W.R.Melik-Adamyan, V.V.Barynin, A.A.Vagin, A.I.Grebenko, V.V.Borisov, K.S.Bartels, I.Fita, M.G.Rossmann. Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 A Resolution. J.Mol.Biol. V. 188 49 1986.
ISSN: ISSN 0022-2836
PubMed: 3712443
DOI: 10.1016/0022-2836(86)90479-1
Page generated: Sun Dec 13 15:29:59 2020

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