Atomistry » Iron » PDB 4bmq-4ccp » 4cat
Atomistry »
  Iron »
    PDB 4bmq-4ccp »
      4cat »

Iron in PDB 4cat: Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution

Enzymatic activity of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution

All present enzymatic activity of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution:
1.11.1.6;

Protein crystallography data

The structure of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution, PDB code: 4cat was solved by B.K.Vainshtein, W.R.Melik-Adamyan, V.V.Barynin, A.A.Vagin, A.I.Grebenko, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 3.00
Space group P 31 2 1
Cell size a, b, c (Å), α, β, γ (°) 144.400, 144.400, 133.800, 90.00, 90.00, 120.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution (pdb code 4cat). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution, PDB code: 4cat:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4cat

Go back to Iron Binding Sites List in 4cat
Iron binding site 1 out of 2 in the Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe660

b:0.0
occ:1.00
FE A:HEM660 0.0 0.0 1.0
ND A:HEM660 2.0 0.0 1.0
NC A:HEM660 2.0 0.0 1.0
NA A:HEM660 2.0 0.0 1.0
NB A:HEM660 2.1 0.0 1.0
C4D A:HEM660 3.0 0.0 1.0
C4C A:HEM660 3.0 0.0 1.0
C1D A:HEM660 3.0 0.0 1.0
C1A A:HEM660 3.0 0.0 1.0
C4A A:HEM660 3.0 0.0 1.0
C1C A:HEM660 3.1 0.0 1.0
C4B A:HEM660 3.1 0.0 1.0
C1B A:HEM660 3.1 0.0 1.0
CHD A:HEM660 3.4 0.0 1.0
CHA A:HEM660 3.4 0.0 1.0
CHB A:HEM660 3.4 0.0 1.0
CHC A:HEM660 3.4 0.0 1.0
C3D A:HEM660 4.2 0.0 1.0
C2D A:HEM660 4.2 0.0 1.0
C3C A:HEM660 4.3 0.0 1.0
C2A A:HEM660 4.3 0.0 1.0
C2C A:HEM660 4.3 0.0 1.0
C3A A:HEM660 4.3 0.0 1.0
C3B A:HEM660 4.3 0.0 1.0
C2B A:HEM660 4.3 0.0 1.0

Iron binding site 2 out of 2 in 4cat

Go back to Iron Binding Sites List in 4cat
Iron binding site 2 out of 2 in the Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe660

b:0.0
occ:1.00
FE B:HEM660 0.0 0.0 1.0
ND B:HEM660 2.0 0.0 1.0
NC B:HEM660 2.0 0.0 1.0
NA B:HEM660 2.0 0.0 1.0
NB B:HEM660 2.1 0.0 1.0
C4D B:HEM660 3.0 0.0 1.0
C4C B:HEM660 3.0 0.0 1.0
C1D B:HEM660 3.0 0.0 1.0
C1A B:HEM660 3.0 0.0 1.0
C4A B:HEM660 3.0 0.0 1.0
C1C B:HEM660 3.1 0.0 1.0
C4B B:HEM660 3.1 0.0 1.0
C1B B:HEM660 3.1 0.0 1.0
CHD B:HEM660 3.4 0.0 1.0
CHA B:HEM660 3.4 0.0 1.0
CHB B:HEM660 3.4 0.0 1.0
CHC B:HEM660 3.4 0.0 1.0
C3D B:HEM660 4.2 0.0 1.0
C2D B:HEM660 4.2 0.0 1.0
C3C B:HEM660 4.3 0.0 1.0
C2A B:HEM660 4.3 0.0 1.0
C2C B:HEM660 4.3 0.0 1.0
C3A B:HEM660 4.3 0.0 1.0
C3B B:HEM660 4.3 0.0 1.0
C2B B:HEM660 4.3 0.0 1.0

Reference:

B.K.Vainshtein, W.R.Melik-Adamyan, V.V.Barynin, A.A.Vagin, A.I.Grebenko, V.V.Borisov, K.S.Bartels, I.Fita, M.G.Rossmann. Three-Dimensional Structure of Catalase From Penicillium Vitale at 2.0 A Resolution. J.Mol.Biol. V. 188 49 1986.
ISSN: ISSN 0022-2836
PubMed: 3712443
DOI: 10.1016/0022-2836(86)90479-1
Page generated: Mon Aug 5 00:23:29 2024

Last articles

Zn in 9JPJ
Zn in 9JP7
Zn in 9JPK
Zn in 9JPL
Zn in 9GN6
Zn in 9GN7
Zn in 9GKU
Zn in 9GKW
Zn in 9GKX
Zn in 9GL0
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy