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Iron in PDB 4fa7: Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus

Enzymatic activity of Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus

All present enzymatic activity of Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus:
1.9.3.1;

Protein crystallography data

The structure of Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus, PDB code: 4fa7 was solved by Y.Li, Y.Chen, C.D.Stout, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 74.83 / 2.50
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 143.550, 98.210, 94.860, 90.00, 127.92, 90.00
R / Rfree (%) 16.9 / 22

Other elements in 4fa7:

The structure of Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus also contains other interesting chemical elements:

Copper (Cu) 3 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus (pdb code 4fa7). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus, PDB code: 4fa7:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4fa7

Go back to Iron Binding Sites List in 4fa7
Iron binding site 1 out of 2 in the Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe602

b:12.2
occ:1.00
FE A:HEM602 0.0 12.2 1.0
NA A:HEM602 2.0 10.8 1.0
NE2 A:HIS386 2.0 13.8 1.0
NC A:HEM602 2.0 11.5 1.0
NB A:HEM602 2.1 12.3 1.0
ND A:HEM602 2.1 11.4 1.0
NE2 A:HIS72 2.1 17.9 1.0
CE1 A:HIS386 2.9 14.7 1.0
C4A A:HEM602 3.0 8.9 1.0
C1A A:HEM602 3.0 12.1 1.0
CE1 A:HIS72 3.0 16.1 1.0
C4C A:HEM602 3.0 10.4 1.0
C1D A:HEM602 3.1 12.1 1.0
C1B A:HEM602 3.1 12.3 1.0
CD2 A:HIS386 3.1 11.8 1.0
C1C A:HEM602 3.1 15.1 1.0
C4D A:HEM602 3.1 12.0 1.0
C4B A:HEM602 3.1 15.0 1.0
CD2 A:HIS72 3.2 16.4 1.0
CHD A:HEM602 3.4 9.9 1.0
CHB A:HEM602 3.4 8.9 1.0
CHA A:HEM602 3.4 9.4 1.0
CHC A:HEM602 3.5 14.7 1.0
ND1 A:HIS386 4.1 14.4 1.0
ND1 A:HIS72 4.2 14.9 1.0
CG A:HIS386 4.2 11.5 1.0
C3A A:HEM602 4.2 9.2 1.0
C2A A:HEM602 4.2 11.1 1.0
CG A:HIS72 4.3 14.9 1.0
C3C A:HEM602 4.3 9.4 1.0
C2C A:HEM602 4.3 10.5 1.0
C2D A:HEM602 4.3 10.8 1.0
C2B A:HEM602 4.3 14.8 1.0
C3B A:HEM602 4.3 16.8 1.0
C3D A:HEM602 4.4 14.8 1.0
OE1 A:GLN42 4.6 9.1 1.0

Iron binding site 2 out of 2 in 4fa7

Go back to Iron Binding Sites List in 4fa7
Iron binding site 2 out of 2 in the Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Recombinant Cytochrome BA3 Oxidase Mutant A204F From Thermus Thermophilus within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe603

b:15.9
occ:1.00
FE A:HAS603 0.0 15.9 1.0
ND A:HAS603 1.9 16.1 1.0
NB A:HAS603 2.1 11.2 1.0
NC A:HAS603 2.1 12.6 1.0
NA A:HAS603 2.1 13.7 1.0
O1 A:PEO604 2.2 7.4 1.0
NE2 A:HIS384 2.2 14.4 1.0
C1D A:HAS603 2.9 16.6 1.0
C4D A:HAS603 3.1 17.9 1.0
C1B A:HAS603 3.1 12.8 1.0
C4B A:HAS603 3.1 12.4 1.0
C4C A:HAS603 3.1 12.8 1.0
C1A A:HAS603 3.1 14.0 1.0
C1C A:HAS603 3.2 11.5 1.0
C4A A:HAS603 3.2 12.9 1.0
CD2 A:HIS384 3.2 12.6 1.0
CE1 A:HIS384 3.3 16.9 1.0
CHB A:HAS603 3.4 15.1 1.0
O2 A:PEO604 3.4 14.5 1.0
CHA A:HAS603 3.5 13.2 1.0
CHC A:HAS603 3.5 11.1 1.0
CHD A:HAS603 3.6 12.2 1.0
C2D A:HAS603 4.2 17.7 1.0
C3D A:HAS603 4.2 16.9 1.0
C3C A:HAS603 4.3 13.0 1.0
CG A:HIS384 4.4 11.4 1.0
ND1 A:HIS384 4.4 14.6 1.0
C2B A:HAS603 4.4 14.2 1.0
C2C A:HAS603 4.4 12.4 1.0
C3B A:HAS603 4.4 14.2 1.0
C2A A:HAS603 4.5 13.0 1.0
C3A A:HAS603 4.5 12.4 1.0
CU A:CU601 4.8 15.1 1.0
ND2 A:ASN366 4.9 9.9 1.0

Reference:

Y.Li, Y.Chen, C.D.Stout. N/A N/A.
Page generated: Mon Aug 5 02:07:54 2024

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