Iron in PDB 4fas: Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
Enzymatic activity of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
All present enzymatic activity of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea:
1.7.3.4;
Protein crystallography data
The structure of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea, PDB code: 4fas
was solved by
P.E.Cedervall,
C.M.Wilmot,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
42.89 /
2.10
|
|
Space group
|
P 21 21 2
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
140.731,
142.618,
107.376,
90.00,
90.00,
90.00
|
|
R / Rfree (%)
|
16.5 /
20.6
|
Iron Binding Sites:
Pages:
>>> Page 1 <<<
Page 2, Binding sites: 11 -
20;
Page 3, Binding sites: 21 -
24;
Binding sites:
The binding sites of Iron atom in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
(pdb code 4fas). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 24 binding sites of Iron where determined in the
Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea, PDB code: 4fas:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
9;
10;
Iron binding site 1 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 1 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe601
b:28.3
occ:1.00
|
FE
|
A:HEC601
|
0.0
|
28.3
|
1.0
|
|
ND
|
A:HEC601
|
2.0
|
28.8
|
1.0
|
|
NE2
|
A:HIS83
|
2.0
|
31.8
|
1.0
|
|
NB
|
A:HEC601
|
2.0
|
29.5
|
1.0
|
|
NA
|
A:HEC601
|
2.1
|
29.3
|
1.0
|
|
NE2
|
A:HIS160
|
2.1
|
32.0
|
1.0
|
|
NC
|
A:HEC601
|
2.2
|
31.5
|
1.0
|
|
CE1
|
A:HIS83
|
2.9
|
27.7
|
1.0
|
|
C4D
|
A:HEC601
|
3.0
|
28.7
|
1.0
|
|
C4B
|
A:HEC601
|
3.0
|
32.1
|
1.0
|
|
C1D
|
A:HEC601
|
3.0
|
28.2
|
1.0
|
|
CE1
|
A:HIS160
|
3.0
|
30.8
|
1.0
|
|
C1B
|
A:HEC601
|
3.0
|
30.8
|
1.0
|
|
C1A
|
A:HEC601
|
3.0
|
28.2
|
1.0
|
|
C4A
|
A:HEC601
|
3.1
|
30.3
|
1.0
|
|
CD2
|
A:HIS83
|
3.1
|
30.0
|
1.0
|
|
C1C
|
A:HEC601
|
3.1
|
28.7
|
1.0
|
|
CD2
|
A:HIS160
|
3.1
|
29.6
|
1.0
|
|
C4C
|
A:HEC601
|
3.2
|
28.3
|
1.0
|
|
CHA
|
A:HEC601
|
3.4
|
21.1
|
1.0
|
|
CHC
|
A:HEC601
|
3.5
|
29.0
|
1.0
|
|
CHB
|
A:HEC601
|
3.5
|
32.1
|
1.0
|
|
CHD
|
A:HEC601
|
3.5
|
30.7
|
1.0
|
|
ND1
|
A:HIS83
|
4.0
|
29.6
|
1.0
|
|
ND1
|
A:HIS160
|
4.2
|
32.0
|
1.0
|
|
CG
|
A:HIS83
|
4.2
|
29.4
|
1.0
|
|
C2D
|
A:HEC601
|
4.2
|
29.9
|
1.0
|
|
C3B
|
A:HEC601
|
4.2
|
30.9
|
1.0
|
|
C3D
|
A:HEC601
|
4.2
|
26.2
|
1.0
|
|
C2B
|
A:HEC601
|
4.2
|
28.5
|
1.0
|
|
CG
|
A:HIS160
|
4.2
|
33.4
|
1.0
|
|
C2A
|
A:HEC601
|
4.3
|
30.7
|
1.0
|
|
C3A
|
A:HEC601
|
4.3
|
29.9
|
1.0
|
|
C2C
|
A:HEC601
|
4.4
|
31.8
|
1.0
|
|
C3C
|
A:HEC601
|
4.4
|
29.3
|
1.0
|
|
Iron binding site 2 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 2 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe602
b:26.3
occ:1.00
|
FE
|
A:HEC602
|
0.0
|
26.3
|
1.0
|
|
NC
|
A:HEC602
|
2.0
|
23.4
|
1.0
|
|
NE2
|
A:HIS246
|
2.0
|
27.2
|
1.0
|
|
NB
|
A:HEC602
|
2.1
|
27.9
|
1.0
|
|
NA
|
A:HEC602
|
2.1
|
26.4
|
1.0
|
|
ND
|
A:HEC602
|
2.1
|
20.4
|
1.0
|
|
NE2
|
A:HIS149
|
2.1
|
27.2
|
1.0
|
|
CD2
|
A:HIS246
|
3.0
|
24.4
|
1.0
|
|
C1B
|
A:HEC602
|
3.0
|
22.8
|
1.0
|
|
C4C
|
A:HEC602
|
3.0
|
23.9
|
1.0
|
|
C4B
|
A:HEC602
|
3.0
|
25.8
|
1.0
|
|
CE1
|
A:HIS246
|
3.1
|
25.1
|
1.0
|
|
C4D
|
A:HEC602
|
3.1
|
23.4
|
1.0
|
|
C1C
|
A:HEC602
|
3.1
|
27.0
|
1.0
|
|
C4A
|
A:HEC602
|
3.1
|
26.0
|
1.0
|
|
C1A
|
A:HEC602
|
3.1
|
22.2
|
1.0
|
|
CE1
|
A:HIS149
|
3.1
|
30.2
|
1.0
|
|
C1D
|
A:HEC602
|
3.1
|
20.8
|
1.0
|
|
CD2
|
A:HIS149
|
3.1
|
27.6
|
1.0
|
|
CHB
|
A:HEC602
|
3.5
|
22.3
|
1.0
|
|
CHA
|
A:HEC602
|
3.5
|
22.4
|
1.0
|
|
CHD
|
A:HEC602
|
3.5
|
26.0
|
1.0
|
|
CHC
|
A:HEC602
|
3.5
|
24.6
|
1.0
|
|
CG
|
A:HIS246
|
4.1
|
23.0
|
1.0
|
|
ND1
|
A:HIS246
|
4.2
|
23.0
|
1.0
|
|
C3B
|
A:HEC602
|
4.2
|
24.1
|
1.0
|
|
ND1
|
A:HIS149
|
4.2
|
29.3
|
1.0
|
|
C2B
|
A:HEC602
|
4.2
|
25.1
|
1.0
|
|
CG
|
A:HIS149
|
4.2
|
28.0
|
1.0
|
|
C3C
|
A:HEC602
|
4.3
|
23.3
|
1.0
|
|
C2C
|
A:HEC602
|
4.3
|
23.8
|
1.0
|
|
C3A
|
A:HEC602
|
4.3
|
21.9
|
1.0
|
|
C2A
|
A:HEC602
|
4.3
|
24.9
|
1.0
|
|
C3D
|
A:HEC602
|
4.3
|
23.7
|
1.0
|
|
C2D
|
A:HEC602
|
4.3
|
22.8
|
1.0
|
|
Iron binding site 3 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 3 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe603
b:28.1
occ:1.00
|
FE
|
A:HEC603
|
0.0
|
28.1
|
1.0
|
|
NE2
|
A:HIS176
|
2.0
|
29.5
|
1.0
|
|
NE2
|
A:HIS99
|
2.0
|
27.1
|
1.0
|
|
NB
|
A:HEC603
|
2.0
|
25.2
|
1.0
|
|
ND
|
A:HEC603
|
2.0
|
29.6
|
1.0
|
|
NA
|
A:HEC603
|
2.1
|
27.2
|
1.0
|
|
NC
|
A:HEC603
|
2.1
|
29.2
|
1.0
|
|
CE1
|
A:HIS99
|
2.9
|
25.9
|
1.0
|
|
C1B
|
A:HEC603
|
2.9
|
24.0
|
1.0
|
|
C1D
|
A:HEC603
|
3.0
|
31.0
|
1.0
|
|
CD2
|
A:HIS176
|
3.0
|
28.2
|
1.0
|
|
CE1
|
A:HIS176
|
3.0
|
27.9
|
1.0
|
|
CD2
|
A:HIS99
|
3.0
|
24.2
|
1.0
|
|
C4B
|
A:HEC603
|
3.0
|
30.7
|
1.0
|
|
C4D
|
A:HEC603
|
3.0
|
32.4
|
1.0
|
|
C4A
|
A:HEC603
|
3.1
|
26.2
|
1.0
|
|
C1A
|
A:HEC603
|
3.1
|
30.7
|
1.0
|
|
C4C
|
A:HEC603
|
3.1
|
28.1
|
1.0
|
|
C1C
|
A:HEC603
|
3.1
|
28.3
|
1.0
|
|
CHD
|
A:HEC603
|
3.4
|
28.6
|
1.0
|
|
CHB
|
A:HEC603
|
3.4
|
24.1
|
1.0
|
|
CHA
|
A:HEC603
|
3.5
|
27.8
|
1.0
|
|
CHC
|
A:HEC603
|
3.5
|
29.2
|
1.0
|
|
ND1
|
A:HIS99
|
4.0
|
25.5
|
1.0
|
|
ND1
|
A:HIS176
|
4.1
|
29.2
|
1.0
|
|
CG
|
A:HIS176
|
4.1
|
28.3
|
1.0
|
|
CG
|
A:HIS99
|
4.1
|
29.5
|
1.0
|
|
C2B
|
A:HEC603
|
4.2
|
29.9
|
1.0
|
|
C2D
|
A:HEC603
|
4.2
|
28.9
|
1.0
|
|
C3B
|
A:HEC603
|
4.2
|
28.1
|
1.0
|
|
C3D
|
A:HEC603
|
4.2
|
30.3
|
1.0
|
|
C3A
|
A:HEC603
|
4.3
|
26.8
|
1.0
|
|
C2A
|
A:HEC603
|
4.3
|
30.6
|
1.0
|
|
C3C
|
A:HEC603
|
4.3
|
25.9
|
1.0
|
|
C2C
|
A:HEC603
|
4.3
|
25.6
|
1.0
|
|
CMA
|
A:HEC604
|
4.9
|
28.3
|
1.0
|
|
Iron binding site 4 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 4 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe604
b:25.5
occ:1.00
|
FE
|
A:HEC604
|
0.0
|
25.5
|
1.0
|
|
NA
|
A:HEC604
|
2.0
|
24.4
|
1.0
|
|
NC
|
A:HEC604
|
2.0
|
26.9
|
1.0
|
|
NE2
|
A:HIS323
|
2.1
|
27.7
|
1.0
|
|
ND
|
A:HEC604
|
2.1
|
25.7
|
1.0
|
|
NE2
|
A:HIS243
|
2.1
|
24.2
|
1.0
|
|
NB
|
A:HEC604
|
2.1
|
27.1
|
1.0
|
|
C1A
|
A:HEC604
|
2.9
|
26.3
|
1.0
|
|
C1C
|
A:HEC604
|
3.0
|
26.0
|
1.0
|
|
CD2
|
A:HIS323
|
3.0
|
24.5
|
1.0
|
|
C4A
|
A:HEC604
|
3.0
|
24.9
|
1.0
|
|
C4C
|
A:HEC604
|
3.0
|
24.9
|
1.0
|
|
C4D
|
A:HEC604
|
3.1
|
26.2
|
1.0
|
|
CE1
|
A:HIS323
|
3.1
|
23.1
|
1.0
|
|
CD2
|
A:HIS243
|
3.1
|
22.0
|
1.0
|
|
C4B
|
A:HEC604
|
3.1
|
22.1
|
1.0
|
|
CE1
|
A:HIS243
|
3.1
|
25.7
|
1.0
|
|
C1D
|
A:HEC604
|
3.1
|
24.8
|
1.0
|
|
C1B
|
A:HEC604
|
3.1
|
23.7
|
1.0
|
|
CHA
|
A:HEC604
|
3.4
|
25.9
|
1.0
|
|
CHC
|
A:HEC604
|
3.4
|
24.3
|
1.0
|
|
CHD
|
A:HEC604
|
3.5
|
26.3
|
1.0
|
|
CHB
|
A:HEC604
|
3.5
|
24.7
|
1.0
|
|
CG
|
A:HIS323
|
4.2
|
28.4
|
1.0
|
|
ND1
|
A:HIS323
|
4.2
|
30.1
|
1.0
|
|
C2A
|
A:HEC604
|
4.2
|
29.4
|
1.0
|
|
ND1
|
A:HIS243
|
4.2
|
23.5
|
1.0
|
|
C3A
|
A:HEC604
|
4.2
|
25.9
|
1.0
|
|
C2C
|
A:HEC604
|
4.2
|
25.1
|
1.0
|
|
CG
|
A:HIS243
|
4.2
|
24.3
|
1.0
|
|
C3C
|
A:HEC604
|
4.2
|
24.4
|
1.0
|
|
C3B
|
A:HEC604
|
4.3
|
24.1
|
1.0
|
|
C3D
|
A:HEC604
|
4.3
|
22.2
|
1.0
|
|
C2D
|
A:HEC604
|
4.3
|
23.5
|
1.0
|
|
C2B
|
A:HEC604
|
4.3
|
26.9
|
1.0
|
|
O
|
A:HOH794
|
4.7
|
30.8
|
1.0
|
|
Iron binding site 5 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 5 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe605
b:23.8
occ:1.00
|
FE
|
A:HEC605
|
0.0
|
23.8
|
1.0
|
|
ND
|
A:HEC605
|
2.0
|
23.4
|
1.0
|
|
NB
|
A:HEC605
|
2.0
|
23.0
|
1.0
|
|
NE2
|
A:HIS263
|
2.0
|
22.1
|
1.0
|
|
NC
|
A:HEC605
|
2.1
|
24.1
|
1.0
|
|
NE2
|
A:HIS204
|
2.1
|
23.9
|
1.0
|
|
NA
|
A:HEC605
|
2.1
|
26.0
|
1.0
|
|
CD2
|
A:HIS263
|
3.0
|
18.4
|
1.0
|
|
C4D
|
A:HEC605
|
3.0
|
27.5
|
1.0
|
|
C1D
|
A:HEC605
|
3.0
|
22.8
|
1.0
|
|
C1B
|
A:HEC605
|
3.0
|
26.0
|
1.0
|
|
CE1
|
A:HIS263
|
3.0
|
23.5
|
1.0
|
|
C4B
|
A:HEC605
|
3.0
|
22.3
|
1.0
|
|
C1C
|
A:HEC605
|
3.0
|
24.6
|
1.0
|
|
C4C
|
A:HEC605
|
3.1
|
23.4
|
1.0
|
|
CE1
|
A:HIS204
|
3.1
|
23.7
|
1.0
|
|
C4A
|
A:HEC605
|
3.1
|
25.2
|
1.0
|
|
CD2
|
A:HIS204
|
3.1
|
22.5
|
1.0
|
|
C1A
|
A:HEC605
|
3.1
|
25.2
|
1.0
|
|
CHD
|
A:HEC605
|
3.4
|
22.2
|
1.0
|
|
CHA
|
A:HEC605
|
3.4
|
24.3
|
1.0
|
|
CHC
|
A:HEC605
|
3.5
|
20.9
|
1.0
|
|
CHB
|
A:HEC605
|
3.5
|
22.8
|
1.0
|
|
ND1
|
A:HIS263
|
4.1
|
21.5
|
1.0
|
|
CG
|
A:HIS263
|
4.1
|
23.9
|
1.0
|
|
C3D
|
A:HEC605
|
4.2
|
27.2
|
1.0
|
|
ND1
|
A:HIS204
|
4.2
|
21.6
|
1.0
|
|
C2D
|
A:HEC605
|
4.2
|
23.9
|
1.0
|
|
C2B
|
A:HEC605
|
4.2
|
23.7
|
1.0
|
|
C3B
|
A:HEC605
|
4.2
|
20.5
|
1.0
|
|
CG
|
A:HIS204
|
4.3
|
24.6
|
1.0
|
|
C2C
|
A:HEC605
|
4.3
|
23.6
|
1.0
|
|
C3A
|
A:HEC605
|
4.3
|
24.8
|
1.0
|
|
C3C
|
A:HEC605
|
4.3
|
20.0
|
1.0
|
|
C2A
|
A:HEC605
|
4.3
|
26.2
|
1.0
|
|
ND2
|
A:ASN235
|
4.8
|
28.3
|
1.0
|
|
Iron binding site 6 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 6 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe606
b:24.4
occ:1.00
|
FE
|
A:HEC606
|
0.0
|
24.4
|
1.0
|
|
NA
|
A:HEC606
|
2.0
|
22.5
|
1.0
|
|
NE2
|
A:HIS314
|
2.0
|
26.9
|
1.0
|
|
NC
|
A:HEC606
|
2.0
|
23.4
|
1.0
|
|
NB
|
A:HEC606
|
2.1
|
22.7
|
1.0
|
|
NE2
|
A:HIS459
|
2.1
|
22.6
|
1.0
|
|
ND
|
A:HEC606
|
2.1
|
23.2
|
1.0
|
|
CE1
|
A:HIS314
|
2.8
|
23.6
|
1.0
|
|
C4A
|
A:HEC606
|
3.0
|
25.6
|
1.0
|
|
CD2
|
A:HIS459
|
3.0
|
17.0
|
1.0
|
|
C1A
|
A:HEC606
|
3.0
|
23.8
|
1.0
|
|
C4C
|
A:HEC606
|
3.0
|
23.4
|
1.0
|
|
C1B
|
A:HEC606
|
3.0
|
24.5
|
1.0
|
|
C1C
|
A:HEC606
|
3.1
|
26.7
|
1.0
|
|
CD2
|
A:HIS314
|
3.1
|
26.6
|
1.0
|
|
C4D
|
A:HEC606
|
3.1
|
22.5
|
1.0
|
|
C1D
|
A:HEC606
|
3.1
|
22.5
|
1.0
|
|
C4B
|
A:HEC606
|
3.1
|
22.2
|
1.0
|
|
CE1
|
A:HIS459
|
3.2
|
24.5
|
1.0
|
|
CHA
|
A:HEC606
|
3.4
|
21.7
|
1.0
|
|
CHB
|
A:HEC606
|
3.4
|
21.9
|
1.0
|
|
CHD
|
A:HEC606
|
3.4
|
21.3
|
1.0
|
|
CHC
|
A:HEC606
|
3.6
|
21.1
|
1.0
|
|
ND1
|
A:HIS314
|
4.0
|
26.1
|
1.0
|
|
CG
|
A:HIS314
|
4.1
|
27.4
|
1.0
|
|
CG
|
A:HIS459
|
4.1
|
21.1
|
1.0
|
|
C2A
|
A:HEC606
|
4.2
|
24.6
|
1.0
|
|
C3A
|
A:HEC606
|
4.2
|
21.6
|
1.0
|
|
C3C
|
A:HEC606
|
4.2
|
23.2
|
1.0
|
|
ND1
|
A:HIS459
|
4.2
|
24.1
|
1.0
|
|
C2C
|
A:HEC606
|
4.2
|
22.7
|
1.0
|
|
C2B
|
A:HEC606
|
4.3
|
26.8
|
1.0
|
|
C3D
|
A:HEC606
|
4.3
|
23.0
|
1.0
|
|
C3B
|
A:HEC606
|
4.3
|
24.2
|
1.0
|
|
C2D
|
A:HEC606
|
4.4
|
24.6
|
1.0
|
|
ND2
|
A:ASN270
|
4.7
|
20.3
|
1.0
|
|
Iron binding site 7 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 7 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe607
b:26.8
occ:1.00
|
FE
|
A:HEC607
|
0.0
|
26.8
|
1.0
|
|
NA
|
A:HEC607
|
2.0
|
24.6
|
1.0
|
|
ND
|
A:HEC607
|
2.1
|
23.0
|
1.0
|
|
NE2
|
A:HIS364
|
2.1
|
30.4
|
1.0
|
|
NC
|
A:HEC607
|
2.1
|
24.6
|
1.0
|
|
NE2
|
A:HIS279
|
2.1
|
24.0
|
1.0
|
|
NB
|
A:HEC607
|
2.1
|
25.4
|
1.0
|
|
C4D
|
A:HEC607
|
3.0
|
23.4
|
1.0
|
|
CD2
|
A:HIS364
|
3.0
|
26.5
|
1.0
|
|
C4A
|
A:HEC607
|
3.0
|
25.2
|
1.0
|
|
C1A
|
A:HEC607
|
3.0
|
25.4
|
1.0
|
|
CE1
|
A:HIS279
|
3.1
|
22.2
|
1.0
|
|
C4C
|
A:HEC607
|
3.1
|
24.1
|
1.0
|
|
CE1
|
A:HIS364
|
3.1
|
23.6
|
1.0
|
|
C1C
|
A:HEC607
|
3.1
|
24.3
|
1.0
|
|
C1B
|
A:HEC607
|
3.1
|
27.0
|
1.0
|
|
CD2
|
A:HIS279
|
3.1
|
17.9
|
1.0
|
|
C1D
|
A:HEC607
|
3.1
|
28.2
|
1.0
|
|
C4B
|
A:HEC607
|
3.1
|
27.0
|
1.0
|
|
CHA
|
A:HEC607
|
3.4
|
22.6
|
1.0
|
|
CHD
|
A:HEC607
|
3.5
|
22.9
|
1.0
|
|
CHB
|
A:HEC607
|
3.5
|
25.3
|
1.0
|
|
CHC
|
A:HEC607
|
3.5
|
23.6
|
1.0
|
|
ND1
|
A:HIS364
|
4.2
|
27.4
|
1.0
|
|
ND1
|
A:HIS279
|
4.2
|
23.5
|
1.0
|
|
CG
|
A:HIS364
|
4.2
|
27.9
|
1.0
|
|
CG
|
A:HIS279
|
4.2
|
20.6
|
1.0
|
|
C3D
|
A:HEC607
|
4.2
|
26.4
|
1.0
|
|
C3A
|
A:HEC607
|
4.2
|
27.2
|
1.0
|
|
C2A
|
A:HEC607
|
4.2
|
27.6
|
1.0
|
|
C3C
|
A:HEC607
|
4.3
|
26.6
|
1.0
|
|
C2B
|
A:HEC607
|
4.3
|
28.7
|
1.0
|
|
C2C
|
A:HEC607
|
4.3
|
24.2
|
1.0
|
|
C3B
|
A:HEC607
|
4.3
|
24.4
|
1.0
|
|
C2D
|
A:HEC607
|
4.3
|
24.7
|
1.0
|
|
CG
|
A:PRO308
|
4.9
|
20.8
|
1.0
|
|
O
|
A:HOH703
|
5.0
|
26.0
|
1.0
|
|
Iron binding site 8 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 8 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe608
b:41.7
occ:1.00
|
FE
|
A:ISW608
|
0.0
|
41.7
|
1.0
|
|
NA
|
A:ISW608
|
2.1
|
45.7
|
1.0
|
|
ND
|
A:ISW608
|
2.1
|
35.5
|
1.0
|
|
NB
|
A:ISW608
|
2.1
|
38.9
|
1.0
|
|
NC
|
A:ISW608
|
2.1
|
32.7
|
1.0
|
|
O
|
A:HOH717
|
2.4
|
29.2
|
1.0
|
|
NE2
|
B:HIS233
|
2.5
|
23.3
|
1.0
|
|
C1B
|
A:ISW608
|
3.0
|
39.0
|
1.0
|
|
C4D
|
A:ISW608
|
3.1
|
35.8
|
1.0
|
|
C4A
|
A:ISW608
|
3.1
|
47.6
|
1.0
|
|
C1D
|
A:ISW608
|
3.1
|
32.6
|
1.0
|
|
C1A
|
A:ISW608
|
3.1
|
45.4
|
1.0
|
|
C4C
|
A:ISW608
|
3.1
|
25.7
|
1.0
|
|
C1C
|
A:ISW608
|
3.1
|
31.1
|
1.0
|
|
C4B
|
A:ISW608
|
3.1
|
36.3
|
1.0
|
|
CE1
|
B:HIS233
|
3.2
|
26.0
|
1.0
|
|
CHB
|
A:ISW608
|
3.3
|
44.3
|
1.0
|
|
CHA
|
A:ISW608
|
3.3
|
37.6
|
1.0
|
|
OH
|
A:TYR467
|
3.4
|
40.8
|
1.0
|
|
CHD
|
A:ISW608
|
3.4
|
22.6
|
1.0
|
|
CHC
|
A:ISW608
|
3.6
|
32.7
|
1.0
|
|
CD2
|
B:HIS233
|
3.6
|
24.6
|
1.0
|
|
CZ
|
A:TYR467
|
4.0
|
38.8
|
1.0
|
|
CE2
|
A:TYR467
|
4.2
|
34.7
|
1.0
|
|
C3B
|
A:ISW608
|
4.3
|
34.2
|
1.0
|
|
C3D
|
A:ISW608
|
4.4
|
30.7
|
1.0
|
|
C2D
|
A:ISW608
|
4.4
|
30.5
|
1.0
|
|
C2B
|
A:ISW608
|
4.4
|
39.3
|
1.0
|
|
C3C
|
A:ISW608
|
4.4
|
24.8
|
1.0
|
|
C2C
|
A:ISW608
|
4.4
|
27.3
|
1.0
|
|
C3A
|
A:ISW608
|
4.4
|
47.5
|
1.0
|
|
C2A
|
A:ISW608
|
4.4
|
46.9
|
1.0
|
|
ND1
|
B:HIS233
|
4.4
|
23.3
|
1.0
|
|
NE2
|
B:HIS268
|
4.6
|
28.5
|
1.0
|
|
CG
|
B:HIS233
|
4.7
|
26.0
|
1.0
|
|
Iron binding site 9 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 9 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 9 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe601
b:36.5
occ:1.00
|
FE
|
B:HEC601
|
0.0
|
36.5
|
1.0
|
|
NE2
|
B:HIS160
|
2.0
|
41.9
|
1.0
|
|
NA
|
B:HEC601
|
2.1
|
33.8
|
1.0
|
|
ND
|
B:HEC601
|
2.1
|
34.6
|
1.0
|
|
NB
|
B:HEC601
|
2.1
|
34.8
|
1.0
|
|
NE2
|
B:HIS83
|
2.1
|
39.1
|
1.0
|
|
NC
|
B:HEC601
|
2.2
|
33.2
|
1.0
|
|
CE1
|
B:HIS83
|
2.9
|
34.4
|
1.0
|
|
CE1
|
B:HIS160
|
3.0
|
42.4
|
1.0
|
|
CD2
|
B:HIS160
|
3.0
|
39.9
|
1.0
|
|
C4A
|
B:HEC601
|
3.0
|
34.5
|
1.0
|
|
C1D
|
B:HEC601
|
3.0
|
34.5
|
1.0
|
|
C1B
|
B:HEC601
|
3.0
|
34.7
|
1.0
|
|
C1A
|
B:HEC601
|
3.1
|
36.2
|
1.0
|
|
C4B
|
B:HEC601
|
3.1
|
36.5
|
1.0
|
|
C4D
|
B:HEC601
|
3.1
|
36.3
|
1.0
|
|
C4C
|
B:HEC601
|
3.2
|
35.7
|
1.0
|
|
C1C
|
B:HEC601
|
3.2
|
36.5
|
1.0
|
|
CD2
|
B:HIS83
|
3.2
|
39.5
|
1.0
|
|
CHB
|
B:HEC601
|
3.4
|
36.6
|
1.0
|
|
CHD
|
B:HEC601
|
3.5
|
36.0
|
1.0
|
|
CHA
|
B:HEC601
|
3.5
|
36.3
|
1.0
|
|
CHC
|
B:HEC601
|
3.6
|
37.6
|
1.0
|
|
ND1
|
B:HIS160
|
4.1
|
42.8
|
1.0
|
|
ND1
|
B:HIS83
|
4.1
|
38.5
|
1.0
|
|
CG
|
B:HIS160
|
4.1
|
44.4
|
1.0
|
|
C3A
|
B:HEC601
|
4.2
|
33.8
|
1.0
|
|
C2D
|
B:HEC601
|
4.2
|
34.7
|
1.0
|
|
C2B
|
B:HEC601
|
4.3
|
37.3
|
1.0
|
|
C2A
|
B:HEC601
|
4.3
|
33.8
|
1.0
|
|
C3B
|
B:HEC601
|
4.3
|
35.9
|
1.0
|
|
CG
|
B:HIS83
|
4.3
|
40.2
|
1.0
|
|
C3D
|
B:HEC601
|
4.3
|
34.0
|
1.0
|
|
C2C
|
B:HEC601
|
4.4
|
35.9
|
1.0
|
|
C3C
|
B:HEC601
|
4.4
|
36.0
|
1.0
|
|
CD1
|
B:ILE164
|
4.6
|
40.8
|
1.0
|
|
Iron binding site 10 out
of 24 in 4fas
Go back to
Iron Binding Sites List in 4fas
Iron binding site 10 out
of 24 in the Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 10 of Complex Crystal Structure of Hydroxylamine Oxidoreductase and NE1300 From Nitrosomonas Europaea within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe602
b:29.0
occ:1.00
|
FE
|
B:HEC602
|
0.0
|
29.0
|
1.0
|
|
NB
|
B:HEC602
|
2.0
|
26.8
|
1.0
|
|
NC
|
B:HEC602
|
2.0
|
24.8
|
1.0
|
|
NE2
|
B:HIS149
|
2.1
|
29.6
|
1.0
|
|
ND
|
B:HEC602
|
2.1
|
25.8
|
1.0
|
|
NA
|
B:HEC602
|
2.1
|
28.8
|
1.0
|
|
NE2
|
B:HIS246
|
2.1
|
25.3
|
1.0
|
|
C4B
|
B:HEC602
|
3.0
|
26.8
|
1.0
|
|
CE1
|
B:HIS149
|
3.0
|
32.8
|
1.0
|
|
CD2
|
B:HIS246
|
3.0
|
27.3
|
1.0
|
|
C1C
|
B:HEC602
|
3.0
|
23.5
|
1.0
|
|
C1B
|
B:HEC602
|
3.0
|
24.8
|
1.0
|
|
C4C
|
B:HEC602
|
3.1
|
26.6
|
1.0
|
|
C1D
|
B:HEC602
|
3.1
|
26.0
|
1.0
|
|
C1A
|
B:HEC602
|
3.1
|
27.9
|
1.0
|
|
C4D
|
B:HEC602
|
3.1
|
27.4
|
1.0
|
|
C4A
|
B:HEC602
|
3.1
|
24.4
|
1.0
|
|
CD2
|
B:HIS149
|
3.1
|
28.9
|
1.0
|
|
CE1
|
B:HIS246
|
3.2
|
26.9
|
1.0
|
|
CHC
|
B:HEC602
|
3.3
|
27.1
|
1.0
|
|
CHA
|
B:HEC602
|
3.5
|
25.6
|
1.0
|
|
CHD
|
B:HEC602
|
3.5
|
24.8
|
1.0
|
|
CHB
|
B:HEC602
|
3.5
|
23.7
|
1.0
|
|
ND1
|
B:HIS149
|
4.1
|
33.8
|
1.0
|
|
C3B
|
B:HEC602
|
4.2
|
31.1
|
1.0
|
|
C2B
|
B:HEC602
|
4.2
|
29.4
|
1.0
|
|
CG
|
B:HIS246
|
4.2
|
30.2
|
1.0
|
|
CG
|
B:HIS149
|
4.2
|
35.0
|
1.0
|
|
C2C
|
B:HEC602
|
4.2
|
22.3
|
1.0
|
|
ND1
|
B:HIS246
|
4.3
|
27.0
|
1.0
|
|
C3A
|
B:HEC602
|
4.3
|
24.8
|
1.0
|
|
C2D
|
B:HEC602
|
4.3
|
24.5
|
1.0
|
|
C2A
|
B:HEC602
|
4.3
|
25.3
|
1.0
|
|
C3C
|
B:HEC602
|
4.3
|
23.5
|
1.0
|
|
C3D
|
B:HEC602
|
4.3
|
22.6
|
1.0
|
|
Reference:
P.E.Cedervall,
A.B.Hooper,
C.M.Wilmot.
Structural Studies of Hydroxylamine Oxidoreductase Reveal A Unique Heme Cofactor and A Previously Unidentified Interaction Partner. Biochemistry V. 52 6211 2013.
ISSN: ISSN 0006-2960
PubMed: 23952581
DOI: 10.1021/BI400960W
Page generated: Mon Aug 5 02:09:27 2024
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