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Iron in PDB 4fby: Fs X-Ray Diffraction of Photosystem II
Enzymatic activity of Fs X-Ray Diffraction of Photosystem II
All present enzymatic activity of Fs X-Ray Diffraction of Photosystem II:
1.10.3.9;
1.10.3.9;
Protein crystallography data
The structure of Fs X-Ray Diffraction of Photosystem II, PDB code: 4fby
was solved by
J.Kern,
R.Alonso-Mori,
J.Hellmich,
R.Tran,
J.Hattne,
H.Laksmono,
C.Gloeckner,
N.Echols,
R.G.Sierra,
J.Sellberg,
B.Lassalle-Kaiser,
R.J.Gildea,
P.Glatzel,
R.W.Grosse-Kunstleve,
M.J.Latimer,
T.A.Mcqueen,
D.Difiore,
A.R.Fry,
M.M.Messerschmidt,
A.Miahnahri,
D.W.Schafer,
M.M.Seibert,
D.Sokaras,
T.-C.Weng,
P.H.Zwart,
W.E.White,
P.D.Adams,
M.J.Bogan,
S.Boutet,
G.J.Williams,
J.Messinger,
N.K.Sauter,
A.Zouni,
U.Bergmann,
J.Yano,
V.K.Yachandra,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 85.89 / 6.56 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 130.783, 227.764, 308.630, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 36.6 / 38.5 |
Other elements in 4fby:
The structure of Fs X-Ray Diffraction of Photosystem II also contains other interesting chemical elements:
| Magnesium | (Mg) | 70 atoms |
| Manganese | (Mn) | 8 atoms |
| Chlorine | (Cl) | 2 atoms |
| Calcium | (Ca) | 4 atoms |
Iron Binding Sites:
The binding sites of Iron atom in the Fs X-Ray Diffraction of Photosystem II
(pdb code 4fby). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 6 binding sites of Iron where determined in the Fs X-Ray Diffraction of Photosystem II, PDB code: 4fby:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Iron where determined in the Fs X-Ray Diffraction of Photosystem II, PDB code: 4fby:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;
Iron binding site 1 out of 6 in 4fby
Go back to
Iron Binding Sites List in 4fby
Iron binding site 1 out
of 6 in the Fs X-Ray Diffraction of Photosystem II
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Fs X-Ray Diffraction of Photosystem II within 5.0Å range:
|
Iron binding site 2 out of 6 in 4fby
Go back to
Iron Binding Sites List in 4fby
Iron binding site 2 out
of 6 in the Fs X-Ray Diffraction of Photosystem II
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Fs X-Ray Diffraction of Photosystem II within 5.0Å range:
|
Iron binding site 3 out of 6 in 4fby
Go back to
Iron Binding Sites List in 4fby
Iron binding site 3 out
of 6 in the Fs X-Ray Diffraction of Photosystem II
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Fs X-Ray Diffraction of Photosystem II within 5.0Å range:
|
Iron binding site 4 out of 6 in 4fby
Go back to
Iron Binding Sites List in 4fby
Iron binding site 4 out
of 6 in the Fs X-Ray Diffraction of Photosystem II
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Fs X-Ray Diffraction of Photosystem II within 5.0Å range:
|
Iron binding site 5 out of 6 in 4fby
Go back to
Iron Binding Sites List in 4fby
Iron binding site 5 out
of 6 in the Fs X-Ray Diffraction of Photosystem II
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Fs X-Ray Diffraction of Photosystem II within 5.0Å range:
|
Iron binding site 6 out of 6 in 4fby
Go back to
Iron Binding Sites List in 4fby
Iron binding site 6 out
of 6 in the Fs X-Ray Diffraction of Photosystem II
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Fs X-Ray Diffraction of Photosystem II within 5.0Å range:
|
Reference:
J.Kern,
R.Alonso-Mori,
J.Hellmich,
R.Tran,
J.Hattne,
H.Laksmono,
C.Glockner,
N.Echols,
R.G.Sierra,
J.Sellberg,
B.Lassalle-Kaiser,
R.J.Gildea,
P.Glatzel,
R.W.Grosse-Kunstleve,
M.J.Latimer,
T.A.Mcqueen,
D.Difiore,
A.R.Fry,
M.Messerschmidt,
A.Miahnahri,
D.W.Schafer,
M.M.Seibert,
D.Sokaras,
T.C.Weng,
P.H.Zwart,
W.E.White,
P.D.Adams,
M.J.Bogan,
S.Boutet,
G.J.Williams,
J.Messinger,
N.K.Sauter,
A.Zouni,
U.Bergmann,
J.Yano,
V.K.Yachandra.
Room Temperature Femtosecond X-Ray Diffraction of Photosystem II Microcrystals. Proc.Natl.Acad.Sci.Usa V. 109 9721 2012.
ISSN: ISSN 0027-8424
PubMed: 22665786
DOI: 10.1073/PNAS.1204598109
Page generated: Sun Dec 13 15:34:07 2020
ISSN: ISSN 0027-8424
PubMed: 22665786
DOI: 10.1073/PNAS.1204598109
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