Atomistry » Iron » PDB 4g39-4gl5 » 4g8p
Atomistry »
  Iron »
    PDB 4g39-4gl5 »
      4g8p »

Iron in PDB 4g8p: Rat Heme Oxygenase-1 in Complex with Heme and Co with 16 Hr Illumination: Laser on

Enzymatic activity of Rat Heme Oxygenase-1 in Complex with Heme and Co with 16 Hr Illumination: Laser on

All present enzymatic activity of Rat Heme Oxygenase-1 in Complex with Heme and Co with 16 Hr Illumination: Laser on:
1.14.99.3;

Protein crystallography data

The structure of Rat Heme Oxygenase-1 in Complex with Heme and Co with 16 Hr Illumination: Laser on, PDB code: 4g8p was solved by M.Sugishima, K.Moffat, M.Noguchi, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.08 / 1.90
Space group P 32 2 1
Cell size a, b, c (Å), α, β, γ (°) 66.021, 66.021, 120.248, 90.00, 90.00, 120.00
R / Rfree (%) 16.6 / 20.9

Iron Binding Sites:

The binding sites of Iron atom in the Rat Heme Oxygenase-1 in Complex with Heme and Co with 16 Hr Illumination: Laser on (pdb code 4g8p). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Rat Heme Oxygenase-1 in Complex with Heme and Co with 16 Hr Illumination: Laser on, PDB code: 4g8p:

Iron binding site 1 out of 1 in 4g8p

Go back to Iron Binding Sites List in 4g8p
Iron binding site 1 out of 1 in the Rat Heme Oxygenase-1 in Complex with Heme and Co with 16 Hr Illumination: Laser on


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Rat Heme Oxygenase-1 in Complex with Heme and Co with 16 Hr Illumination: Laser on within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:24.8
occ:1.00
FE A:HEM301 0.0 24.8 1.0
C A:CMO303 1.9 22.8 0.7
NC A:HEM301 2.0 23.2 1.0
NA A:HEM301 2.0 23.5 1.0
NB A:HEM301 2.0 25.0 1.0
ND A:HEM301 2.1 25.1 1.0
NE2 A:HIS25 2.1 23.1 1.0
C4C A:HEM301 3.0 23.1 1.0
O A:CMO303 3.0 30.2 0.7
CD2 A:HIS25 3.1 22.7 1.0
C1C A:HEM301 3.1 24.4 1.0
C4B A:HEM301 3.1 25.4 1.0
C4A A:HEM301 3.1 26.7 1.0
C1D A:HEM301 3.1 22.8 1.0
C1B A:HEM301 3.1 26.2 1.0
C1A A:HEM301 3.1 26.2 1.0
C4D A:HEM301 3.1 23.3 1.0
CE1 A:HIS25 3.1 23.6 1.0
CHD A:HEM301 3.4 21.7 1.0
CHB A:HEM301 3.5 26.4 1.0
CHC A:HEM301 3.5 24.2 1.0
CHA A:HEM301 3.5 24.8 1.0
C3C A:HEM301 4.2 25.4 1.0
ND1 A:HIS25 4.3 23.0 1.0
CG A:HIS25 4.3 22.3 1.0
C3B A:HEM301 4.3 26.5 1.0
C2C A:HEM301 4.4 25.3 1.0
C2A A:HEM301 4.4 27.1 1.0
C3D A:HEM301 4.4 23.7 1.0
C3A A:HEM301 4.4 26.9 1.0
C2D A:HEM301 4.4 22.4 1.0
C2B A:HEM301 4.4 25.9 1.0
CA A:GLY143 4.4 24.9 1.0
O A:HOH431 4.5 31.8 1.0
CA A:GLY139 4.7 17.9 1.0
N A:GLY143 4.7 24.3 1.0
O A:HOH453 4.7 37.2 1.0
O A:GLY139 4.9 18.3 1.0

Reference:

M.Sugishima, K.Moffat, M.Noguchi. Discrimination Between Co and O2 in Heme Oxygenase: Comparison of Static Structures and Dynamic Conformation Changes Following Co Photolysis Biochemistry 2012.
ISSN: ISSN 0006-2960
PubMed: 23043644
DOI: 10.1021/BI301175X
Page generated: Mon Aug 5 02:40:04 2024

Last articles

Zn in 9JYW
Zn in 9IR4
Zn in 9IR3
Zn in 9GMX
Zn in 9GMW
Zn in 9JEJ
Zn in 9ERF
Zn in 9ERE
Zn in 9EGV
Zn in 9EGW
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy