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Iron in PDB 4hhr: Crystal Structure of Fatty Acid Alpha-Dioxygenase (Arabidopsis Thaliana)

Protein crystallography data

The structure of Crystal Structure of Fatty Acid Alpha-Dioxygenase (Arabidopsis Thaliana), PDB code: 4hhr was solved by C.C.Goulah, G.Zhu, M.Koszelak-Rosenblum, M.G.Malkowski, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 47.78 / 1.51
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 101.935, 101.935, 137.510, 90.00, 90.00, 90.00
R / Rfree (%) 15.3 / 18.2

Other elements in 4hhr:

The structure of Crystal Structure of Fatty Acid Alpha-Dioxygenase (Arabidopsis Thaliana) also contains other interesting chemical elements:

Chlorine (Cl) 3 atoms
Calcium (Ca) 8 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Fatty Acid Alpha-Dioxygenase (Arabidopsis Thaliana) (pdb code 4hhr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Fatty Acid Alpha-Dioxygenase (Arabidopsis Thaliana), PDB code: 4hhr:

Iron binding site 1 out of 1 in 4hhr

Go back to Iron Binding Sites List in 4hhr
Iron binding site 1 out of 1 in the Crystal Structure of Fatty Acid Alpha-Dioxygenase (Arabidopsis Thaliana)


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Fatty Acid Alpha-Dioxygenase (Arabidopsis Thaliana) within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe701

b:11.1
occ:1.00
FE A:HEM701 0.0 11.1 1.0
NB A:HEM701 2.0 9.9 1.0
ND A:HEM701 2.0 9.4 1.0
N3 A:IMD702 2.0 15.9 1.0
NC A:HEM701 2.0 10.1 1.0
NA A:HEM701 2.1 11.5 1.0
NE2 A:HIS389 2.1 12.0 1.0
C2 A:IMD702 2.9 21.6 1.0
C4B A:HEM701 3.0 11.2 1.0
C4D A:HEM701 3.0 9.8 1.0
C1D A:HEM701 3.1 8.9 1.0
C4C A:HEM701 3.1 11.0 1.0
CE1 A:HIS389 3.1 11.1 1.0
C1B A:HEM701 3.1 10.8 1.0
CD2 A:HIS389 3.1 11.5 1.0
C1C A:HEM701 3.1 9.5 1.0
C4A A:HEM701 3.1 13.0 1.0
C4 A:IMD702 3.1 23.1 1.0
C1A A:HEM701 3.1 11.2 1.0
CHC A:HEM701 3.4 11.1 1.0
CHD A:HEM701 3.4 11.3 1.0
CHB A:HEM701 3.5 12.1 1.0
CHA A:HEM701 3.5 10.1 1.0
N1 A:IMD702 4.1 21.0 1.0
ND1 A:HIS389 4.2 12.3 1.0
C5 A:IMD702 4.2 25.3 1.0
CG A:HIS389 4.2 10.2 1.0
C3B A:HEM701 4.2 11.5 1.0
C2C A:HEM701 4.3 10.2 1.0
C2B A:HEM701 4.3 11.1 1.0
C3D A:HEM701 4.3 9.7 1.0
C2D A:HEM701 4.3 11.3 1.0
C3C A:HEM701 4.3 9.9 1.0
C3A A:HEM701 4.3 11.2 1.0
C2A A:HEM701 4.3 13.5 1.0
CD2 A:LEU479 4.7 12.3 1.0
O A:HOH979 4.8 20.9 1.0

Reference:

C.C.Goulah, G.Zhu, M.Koszelak-Rosenblum, M.G.Malkowski. The Crystal Structure of Alpha-Dioxygenase Provides Insight Into Diversity in the Cyclooxygenase-Peroxidase Superfamily. Biochemistry V. 52 1364 2013.
ISSN: ISSN 0006-2960
PubMed: 23373518
DOI: 10.1021/BI400013K
Page generated: Mon Aug 5 03:22:19 2024

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