Atomistry » Iron » PDB 4hm7-4ies » 4hvr
Atomistry »
  Iron »
    PDB 4hm7-4ies »
      4hvr »

Iron in PDB 4hvr: X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans

Enzymatic activity of X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans

All present enzymatic activity of X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans:
1.13.11.6;

Protein crystallography data

The structure of X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans, PDB code: 4hvr was solved by F.Liu, L.Chen, A.Liu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.00 / 2.70
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 58.561, 58.561, 230.990, 90.00, 90.00, 120.00
R / Rfree (%) 21.5 / 33.4

Iron Binding Sites:

The binding sites of Iron atom in the X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans (pdb code 4hvr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans, PDB code: 4hvr:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4hvr

Go back to Iron Binding Sites List in 4hvr
Iron binding site 1 out of 2 in the X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:61.5
occ:1.00
NE2 A:HIS95 2.1 55.8 1.0
O2 A:SAL203 2.1 96.6 1.0
ND1 A:HIS51 2.2 54.1 1.0
OE1 A:GLU57 2.3 77.9 1.0
OE2 A:GLU57 2.5 67.2 1.0
O1' A:SAL203 2.6 0.9 1.0
C1' A:SAL203 2.7 0.7 1.0
C2 A:SAL203 2.7 0.6 1.0
CD A:GLU57 2.7 70.1 1.0
C1 A:SAL203 3.0 0.2 1.0
CD2 A:HIS95 3.0 50.9 1.0
CG A:HIS51 3.1 55.0 1.0
CE1 A:HIS95 3.1 52.0 1.0
CE1 A:HIS51 3.2 51.3 1.0
CB A:HIS51 3.3 56.2 1.0
O2' A:SAL203 3.3 0.0 1.0
C3 A:SAL203 3.9 0.2 1.0
CG A:HIS95 4.2 56.2 1.0
ND1 A:HIS95 4.2 54.8 1.0
CG A:GLU57 4.2 66.7 1.0
C6 A:SAL203 4.3 0.0 1.0
OD2 A:ASP53 4.3 56.3 1.0
CD2 A:HIS51 4.3 53.7 1.0
NE2 A:HIS51 4.3 53.8 1.0
CA A:HIS51 4.8 58.2 1.0
CB A:ASP53 4.8 58.0 1.0
CG A:ASP53 5.0 59.7 1.0

Iron binding site 2 out of 2 in 4hvr

Go back to Iron Binding Sites List in 4hvr
Iron binding site 2 out of 2 in the X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate- 3,4-Dioxygenase From Cupriavidus Metallidurans within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe202

b:78.3
occ:1.00
SG A:CYS128 2.2 80.9 1.0
SG A:CYS125 2.4 82.7 1.0
SG A:CYS162 2.4 75.6 1.0
CB A:CYS128 2.7 85.4 1.0
SG A:CYS165 2.7 0.9 1.0
CB A:CYS125 2.9 95.1 1.0
O A:HOH304 2.9 90.9 1.0
CB A:CYS162 3.2 68.8 1.0
N A:CYS128 3.4 79.1 1.0
CA A:CYS128 3.5 79.7 1.0
N A:CYS165 3.5 0.7 1.0
CB A:CYS165 3.5 1.0 1.0
CA A:CYS165 3.9 0.3 1.0
C A:CYS128 4.1 91.5 1.0
N A:GLY129 4.3 98.5 1.0
CA A:CYS125 4.4 87.8 1.0
C A:CYS165 4.4 0.3 1.0
CB A:HIS164 4.5 0.4 1.0
C A:HIS164 4.6 1.0 1.0
N A:HIS130 4.6 88.4 1.0
C A:ALA127 4.7 87.1 1.0
N A:GLY166 4.7 0.6 1.0
CA A:CYS162 4.7 74.5 1.0
CB A:HIS130 4.8 0.2 1.0
CB A:GLN167 4.8 90.5 1.0
CG A:GLN167 4.8 97.4 1.0
N A:GLN167 4.9 91.5 1.0
O A:CYS128 4.9 0.7 1.0
CA A:HIS164 4.9 0.6 1.0
O A:CYS165 5.0 0.0 1.0
N A:HIS164 5.0 0.6 1.0

Reference:

F.Liu, L.Chen, A.Liu. X-Ray Crystal Structure of Salicylic Acid Bound 3-Hydroxyanthranilate-3,4-Dioxygenase From Cupriavidus Metallidurans To Be Published.
Page generated: Sun Dec 13 15:37:08 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy