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Iron in PDB 4j5i: Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Enzymatic activity of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
All present enzymatic activity of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis:
1.14.11.17;
1.14.11.17;
Protein crystallography data
The structure of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis, PDB code: 4j5i
was solved by
Seattle Structural Genomics Center For Infectious Disease (Ssgcid),
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 49.40 / 2.60 |
| Space group | P 1 21 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 77.010, 166.680, 99.720, 90.00, 90.57, 90.00 |
| R / Rfree (%) | 21.1 / 23.4 |
Other elements in 4j5i:
The structure of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis also contains other interesting chemical elements:
| Magnesium | (Mg) | 1 atom |
Iron Binding Sites:
The binding sites of Iron atom in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
(pdb code 4j5i). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis, PDB code: 4j5i:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
In total 8 binding sites of Iron where determined in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis, PDB code: 4j5i:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;
Iron binding site 1 out of 8 in 4j5i
Go back to
Iron Binding Sites List in 4j5i
Iron binding site 1 out
of 8 in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis within 5.0Å range:
|
Iron binding site 2 out of 8 in 4j5i
Go back to
Iron Binding Sites List in 4j5i
Iron binding site 2 out
of 8 in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis within 5.0Å range:
|
Iron binding site 3 out of 8 in 4j5i
Go back to
Iron Binding Sites List in 4j5i
Iron binding site 3 out
of 8 in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis within 5.0Å range:
|
Iron binding site 4 out of 8 in 4j5i
Go back to
Iron Binding Sites List in 4j5i
Iron binding site 4 out
of 8 in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis within 5.0Å range:
|
Iron binding site 5 out of 8 in 4j5i
Go back to
Iron Binding Sites List in 4j5i
Iron binding site 5 out
of 8 in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis within 5.0Å range:
|
Iron binding site 6 out of 8 in 4j5i
Go back to
Iron Binding Sites List in 4j5i
Iron binding site 6 out
of 8 in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis within 5.0Å range:
|
Iron binding site 7 out of 8 in 4j5i
Go back to
Iron Binding Sites List in 4j5i
Iron binding site 7 out
of 8 in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis within 5.0Å range:
|
Iron binding site 8 out of 8 in 4j5i
Go back to
Iron Binding Sites List in 4j5i
Iron binding site 8 out
of 8 in the Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Crystal Structure of An Alpha-Ketoglutarate-Dependent Taurine Dioxygenase From Mycobacterium Smegmatis within 5.0Å range:
|
Reference:
L.Baugh,
I.Phan,
D.W.Begley,
M.C.Clifton,
B.Armour,
D.M.Dranow,
B.M.Taylor,
M.M.Muruthi,
J.Abendroth,
J.W.Fairman,
D.Fox,
S.H.Dieterich,
B.L.Staker,
A.S.Gardberg,
R.Choi,
S.N.Hewitt,
A.J.Napuli,
J.Myers,
L.K.Barrett,
Y.Zhang,
M.Ferrell,
E.Mundt,
K.Thompkins,
N.Tran,
S.Lyons-Abbott,
A.Abramov,
A.Sekar,
D.Serbzhinskiy,
D.Lorimer,
G.W.Buchko,
R.Stacy,
L.J.Stewart,
T.E.Edwards,
W.C.Van Voorhis,
P.J.Myler.
Increasing the Structural Coverage of Tuberculosis Drug Targets. Tuberculosis (Edinb) V. 95 142 2015.
ISSN: ISSN 1472-9792
PubMed: 25613812
DOI: 10.1016/J.TUBE.2014.12.003
Page generated: Sun Dec 13 15:38:10 2020
ISSN: ISSN 1472-9792
PubMed: 25613812
DOI: 10.1016/J.TUBE.2014.12.003
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