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Iron in PDB 4jyy: Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex

Enzymatic activity of Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex

All present enzymatic activity of Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex:
1.15.1.1;

Protein crystallography data

The structure of Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex, PDB code: 4jyy was solved by W.Li, T.L.Ying, C.L.Wang, Y.Zhao, H.F.Wang, X.S.Tan, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 40.19 / 2.10
Space group P 65 2 2
Cell size a, b, c (Å), α, β, γ (°) 80.375, 80.375, 250.532, 90.00, 90.00, 120.00
R / Rfree (%) 18.2 / 19.8

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex (pdb code 4jyy). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex, PDB code: 4jyy:

Iron binding site 1 out of 1 in 4jyy

Go back to Iron Binding Sites List in 4jyy
Iron binding site 1 out of 1 in the Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:39.0
occ:1.00
OD2 A:ASP193 2.0 25.6 1.0
NE2 A:HIS111 2.2 31.7 1.0
NE2 A:HIS197 2.3 29.2 1.0
NE2 A:HIS56 2.3 28.2 1.0
O A:HOH407 2.4 27.2 1.0
CG A:ASP193 3.1 27.4 1.0
CE1 A:HIS111 3.1 29.2 1.0
CD2 A:HIS56 3.1 28.5 1.0
CD2 A:HIS111 3.2 33.4 1.0
CD2 A:HIS197 3.2 30.0 1.0
CE1 A:HIS197 3.3 30.0 1.0
CE1 A:HIS56 3.4 29.1 1.0
OD1 A:ASP193 3.6 28.4 1.0
ND1 A:HIS111 4.2 29.6 1.0
CB A:ASP193 4.3 25.9 1.0
CG A:HIS111 4.3 28.9 1.0
CG A:HIS56 4.3 33.8 1.0
ND1 A:HIS197 4.4 30.6 1.0
ND1 A:HIS56 4.4 29.2 1.0
CG A:HIS197 4.4 30.6 1.0
CZ2 A:TRP159 4.5 24.1 1.0
CB A:TRP195 4.6 24.8 1.0
OE1 A:GLN178 4.7 32.8 1.0
CG A:TRP195 4.8 27.8 1.0
CH2 A:TRP159 4.8 25.9 1.0
CB A:ALA198 4.9 25.1 1.0

Reference:

W.Li, T.L.Ying, C.L.Wang, Y.Zhao, H.F.Wang, X.S.Tan. Crystal Structure of the Azide and Iron Substituted Clostrium Difficile SOD2 Complex To Be Published.
Page generated: Sun Dec 13 15:38:59 2020

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