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Iron in PDB 4lpj: One Minute Iron Loaded Frog M Ferritin

Enzymatic activity of One Minute Iron Loaded Frog M Ferritin

All present enzymatic activity of One Minute Iron Loaded Frog M Ferritin:
1.16.3.1;

Protein crystallography data

The structure of One Minute Iron Loaded Frog M Ferritin, PDB code: 4lpj was solved by S.Mangani, F.Di Pisa, C.Pozzi, P.Turano, D.Lalli, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 21.28 / 1.27
Space group F 4 3 2
Cell size a, b, c (Å), α, β, γ (°) 184.300, 184.300, 184.300, 90.00, 90.00, 90.00
R / Rfree (%) 15 / 17.5

Other elements in 4lpj:

The structure of One Minute Iron Loaded Frog M Ferritin also contains other interesting chemical elements:

Magnesium (Mg) 13 atoms
Chlorine (Cl) 13 atoms

Iron Binding Sites:

The binding sites of Iron atom in the One Minute Iron Loaded Frog M Ferritin (pdb code 4lpj). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the One Minute Iron Loaded Frog M Ferritin, PDB code: 4lpj:

Iron binding site 1 out of 1 in 4lpj

Go back to Iron Binding Sites List in 4lpj
Iron binding site 1 out of 1 in the One Minute Iron Loaded Frog M Ferritin


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of One Minute Iron Loaded Frog M Ferritin within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:16.2
occ:0.30
OE1 A:GLU58 1.9 19.7 1.0
OE2 A:GLU23 2.0 10.9 0.5
OE1 A:GLU23 2.0 12.8 0.5
O A:HOH631 2.1 23.1 0.8
OE1 A:GLU23 2.2 11.0 0.5
ND1 A:HIS61 2.2 18.1 0.5
CD A:GLU23 2.3 10.5 0.5
O A:HOH380 2.7 13.1 0.5
CD A:GLU58 2.9 17.6 1.0
CD A:GLU23 2.9 12.1 0.5
CE1 A:HIS61 3.0 18.5 0.5
OE2 A:GLU23 3.2 12.8 0.5
MG A:MG206 3.3 12.4 0.5
OE2 A:GLU58 3.4 21.8 1.0
O A:HOH642 3.4 16.0 0.5
CG A:HIS61 3.4 17.6 0.5
ND1 A:HIS61 3.6 15.2 0.5
CB A:HIS61 3.8 16.7 0.5
CG A:GLU23 3.8 10.4 0.5
CB A:HIS61 3.9 14.2 0.5
CG1 A:VAL106 4.0 11.1 1.0
CG A:HIS61 4.1 14.6 0.5
CG A:GLU58 4.1 13.7 1.0
NE2 A:HIS61 4.2 18.3 0.5
CG A:GLU23 4.3 11.7 0.5
CA A:GLU58 4.4 10.0 1.0
OE1 A:GLN137 4.4 21.1 1.0
CD2 A:HIS61 4.4 18.1 0.5
CB A:GLU58 4.4 11.5 1.0
CE1 A:HIS61 4.6 15.2 0.5
MG A:MG212 4.6 19.2 0.5
CB A:GLU23 4.7 11.3 0.5
CB A:GLU23 4.7 10.2 0.5
OE2 A:GLU136 4.8 17.1 0.6
CA A:GLU23 5.0 10.9 0.5
CA A:GLU23 5.0 9.9 0.5
O A:GLU58 5.0 10.3 1.0

Reference:

S.Mangani, F.Di Pisa, C.Pozzi, P.Turano, D.Lalli. Crystallographic Snapshots of Iron in Frog M Ferritin To Be Published.
Page generated: Sun Dec 13 15:41:02 2020

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