Iron in PDB 4n0k: Atomic Resolution Crystal Structure of A Cytochrome C-Calixarene Complex

Protein crystallography data

The structure of Atomic Resolution Crystal Structure of A Cytochrome C-Calixarene Complex, PDB code: 4n0k was solved by R.E.Mcgovern, V.E.Pye, P.B.Crowley, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 15.39 / 1.05
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 36.110, 55.780, 119.080, 90.00, 90.00, 90.00
R / Rfree (%) 15.7 / 18

Iron Binding Sites:

The binding sites of Iron atom in the Atomic Resolution Crystal Structure of A Cytochrome C-Calixarene Complex (pdb code 4n0k). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Atomic Resolution Crystal Structure of A Cytochrome C-Calixarene Complex, PDB code: 4n0k:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4n0k

Go back to Iron Binding Sites List in 4n0k
Iron binding site 1 out of 2 in the Atomic Resolution Crystal Structure of A Cytochrome C-Calixarene Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Atomic Resolution Crystal Structure of A Cytochrome C-Calixarene Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:4.5
occ:1.00
FE A:HEM201 0.0 4.5 1.0
ND A:HEM201 2.0 4.5 1.0
NA A:HEM201 2.0 4.4 1.0
NE2 A:HIS18 2.0 4.7 1.0
NB A:HEM201 2.1 4.2 1.0
NC A:HEM201 2.1 4.6 1.0
SD A:MET80 2.3 5.0 1.0
CE1 A:HIS18 2.9 5.0 1.0
C1D A:HEM201 3.0 4.8 1.0
C4D A:HEM201 3.0 4.7 1.0
C1B A:HEM201 3.0 4.5 1.0
C1A A:HEM201 3.0 4.5 1.0
C4A A:HEM201 3.0 4.6 1.0
C4C A:HEM201 3.0 5.0 1.0
C4B A:HEM201 3.0 4.6 1.0
CD2 A:HIS18 3.1 4.9 1.0
C1C A:HEM201 3.1 4.9 1.0
CE A:MET80 3.4 5.6 1.0
CHB A:HEM201 3.4 5.0 1.0
CHD A:HEM201 3.4 5.0 1.0
CG A:MET80 3.4 5.3 1.0
CHA A:HEM201 3.4 4.5 1.0
CHC A:HEM201 3.4 5.2 1.0
ND1 A:HIS18 4.1 5.0 1.0
CG A:HIS18 4.2 5.1 1.0
C2A A:HEM201 4.2 4.7 1.0
C3A A:HEM201 4.2 4.8 1.0
CB A:MET80 4.2 5.3 1.0
C2D A:HEM201 4.3 4.9 1.0
C3C A:HEM201 4.3 5.4 1.0
C2B A:HEM201 4.3 4.9 1.0
C3D A:HEM201 4.3 5.0 1.0
C2C A:HEM201 4.3 5.5 1.0
C3B A:HEM201 4.3 4.8 1.0
OH A:TYR67 4.9 8.1 1.0

Iron binding site 2 out of 2 in 4n0k

Go back to Iron Binding Sites List in 4n0k
Iron binding site 2 out of 2 in the Atomic Resolution Crystal Structure of A Cytochrome C-Calixarene Complex


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Atomic Resolution Crystal Structure of A Cytochrome C-Calixarene Complex within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe201

b:5.7
occ:1.00
FE B:HEM201 0.0 5.7 1.0
ND B:HEM201 1.9 5.9 1.0
NA B:HEM201 2.0 6.0 1.0
NE2 B:HIS18 2.0 5.8 1.0
NC B:HEM201 2.1 6.2 1.0
NB B:HEM201 2.1 5.8 1.0
SD B:MET80 2.3 6.9 1.0
CE1 B:HIS18 2.9 6.3 1.0
C1D B:HEM201 3.0 5.9 1.0
C4D B:HEM201 3.0 6.2 1.0
C1A B:HEM201 3.0 5.8 1.0
C1B B:HEM201 3.0 5.9 1.0
C4A B:HEM201 3.0 6.1 1.0
C4C B:HEM201 3.0 6.3 1.0
C4B B:HEM201 3.0 6.0 1.0
CD2 B:HIS18 3.0 6.2 1.0
C1C B:HEM201 3.1 6.3 1.0
CE B:MET80 3.4 8.3 1.0
CHD B:HEM201 3.4 5.8 1.0
CG B:MET80 3.4 7.5 1.0
CHB B:HEM201 3.4 6.3 1.0
CHA B:HEM201 3.4 6.0 1.0
CHC B:HEM201 3.4 6.5 1.0
ND1 B:HIS18 4.1 6.2 1.0
CG B:HIS18 4.2 5.9 1.0
CB B:MET80 4.2 7.7 1.0
C2A B:HEM201 4.2 6.1 1.0
C3A B:HEM201 4.2 6.2 1.0
C2D B:HEM201 4.3 6.2 1.0
C3C B:HEM201 4.3 6.9 1.0
C3D B:HEM201 4.3 6.1 1.0
C2B B:HEM201 4.3 6.1 1.0
C2C B:HEM201 4.3 7.0 1.0
C3B B:HEM201 4.3 6.3 1.0
OH B:TYR67 4.7 10.8 1.0

Reference:

R.E.Mcgovern, A.A.Mccarthy, P.B.Crowley. A Cytochrome C-Calixarene Structure at Atomic Resolution To Be Published.
Page generated: Sun Dec 13 15:42:11 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy