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Iron in PDB 4o4t: Murine Neuroglobin Under Xenon Pressure 30 Bar

Protein crystallography data

The structure of Murine Neuroglobin Under Xenon Pressure 30 Bar, PDB code: 4o4t was solved by N.Colloc'h, T.Prange, B.Vallone, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 20.00 / 1.90
Space group H 3 2
Cell size a, b, c (Å), α, β, γ (°) 89.118, 89.118, 114.883, 90.00, 90.00, 120.00
R / Rfree (%) 17.1 / 21.7

Other elements in 4o4t:

The structure of Murine Neuroglobin Under Xenon Pressure 30 Bar also contains other interesting chemical elements:

Xenon (Xe) 7 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Murine Neuroglobin Under Xenon Pressure 30 Bar (pdb code 4o4t). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Murine Neuroglobin Under Xenon Pressure 30 Bar, PDB code: 4o4t:

Iron binding site 1 out of 1 in 4o4t

Go back to Iron Binding Sites List in 4o4t
Iron binding site 1 out of 1 in the Murine Neuroglobin Under Xenon Pressure 30 Bar


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Murine Neuroglobin Under Xenon Pressure 30 Bar within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe201

b:16.2
occ:1.00
FE A:HEM201 0.0 16.2 1.0
NC A:HEM201 1.9 16.1 1.0
NA A:HEM201 1.9 16.4 1.0
NE2 A:HIS64 2.0 14.2 1.0
ND A:HEM201 2.1 15.0 1.0
NB A:HEM201 2.1 16.1 1.0
NE2 A:HIS96 2.1 20.4 1.0
CE1 A:HIS64 2.9 13.8 1.0
CD2 A:HIS64 3.0 13.4 1.0
C1C A:HEM201 3.0 17.5 1.0
C1D A:HEM201 3.1 15.6 1.0
C4B A:HEM201 3.1 17.6 1.0
C4A A:HEM201 3.1 16.9 1.0
C4C A:HEM201 3.1 16.5 1.0
C1A A:HEM201 3.1 16.3 1.0
CE1 A:HIS96 3.1 19.7 1.0
CD2 A:HIS96 3.1 18.6 1.0
C4D A:HEM201 3.1 16.2 1.0
C1B A:HEM201 3.2 17.4 1.0
CHC A:HEM201 3.4 17.7 1.0
CHA A:HEM201 3.5 15.7 1.0
CHD A:HEM201 3.5 15.6 1.0
CHB A:HEM201 3.5 17.2 1.0
ND1 A:HIS64 4.1 13.0 1.0
CG A:HIS64 4.1 13.5 1.0
ND1 A:HIS96 4.2 20.0 1.0
CG A:HIS96 4.3 20.3 1.0
C3C A:HEM201 4.3 18.1 1.0
C2C A:HEM201 4.3 18.6 1.0
C3A A:HEM201 4.3 17.2 1.0
C2A A:HEM201 4.3 16.9 1.0
C3B A:HEM201 4.4 18.8 1.0
C2D A:HEM201 4.4 16.1 1.0
C3D A:HEM201 4.4 15.8 1.0
C2B A:HEM201 4.5 17.8 1.0
CG2 A:VAL68 5.0 16.9 1.0

Reference:

J.H.Abraini, G.Marassio, H.N.David, B.Vallone, T.Prange, N.Colloc'h. Crystallographic Studies with Xenon and Nitrous Oxide Provide Evidence For Protein-Dependent Processes in the Mechanisms of General Anesthesia Anesthesiology 2014.
ISSN: ESSN 1528-1175
PubMed: 25211169
DOI: 10.1097/ALN.0000000000000435
Page generated: Sun Dec 13 15:43:28 2020

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