Iron in PDB 4oxf: Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms

Protein crystallography data

The structure of Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms, PDB code: 4oxf was solved by J.A.Blanco, E.Boix, M.Moussaoui, V.A.Salazar, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 50.88 / 1.50
Space group P 43 2 2
Cell size a, b, c (Å), α, β, γ (°) 62.535, 62.535, 175.050, 90.00, 90.00, 90.00
R / Rfree (%) 19.7 / 23.1

Iron Binding Sites:

The binding sites of Iron atom in the Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms (pdb code 4oxf). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms, PDB code: 4oxf:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 4oxf

Go back to Iron Binding Sites List in 4oxf
Iron binding site 1 out of 2 in the Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe304

b:17.4
occ:0.64
O1 A:CIT302 2.2 17.1 0.5
C4 A:CIT302 2.4 20.9 0.5
O4 A:CIT302 2.7 20.5 0.5
C5 A:CIT302 3.0 18.3 0.5
O7 A:CIT302 3.0 30.0 0.5
C3 A:CIT302 3.1 23.0 0.5
C1 A:CIT302 3.2 17.1 0.5
C2 A:CIT302 3.6 19.5 0.5
O A:HOH444 3.8 26.6 1.0
NH2 A:ARG34 4.1 18.4 1.0
O3 A:CIT302 4.2 15.6 0.5
O A:HOH451 4.3 31.6 1.0
O2 A:CIT302 4.4 15.4 0.5
C6 A:CIT302 4.6 22.9 0.5
ND2 A:ASN39 4.7 19.8 0.6
CB A:ARG36 4.8 23.1 0.6
CB A:ARG36 4.8 23.1 0.5
O A:HOH469 4.9 39.7 1.0
O A:HOH422 4.9 30.4 1.0

Iron binding site 2 out of 2 in 4oxf

Go back to Iron Binding Sites List in 4oxf
Iron binding site 2 out of 2 in the Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe303

b:24.9
occ:0.59
O7 B:CIT302 1.8 39.0 0.4
O B:HOH405 2.0 34.3 1.0
O1 B:CIT302 2.1 32.6 0.4
C4 B:CIT302 2.1 28.5 0.4
C3 B:CIT302 2.3 28.1 0.4
C1 B:CIT302 2.9 21.6 0.4
C2 B:CIT302 3.1 27.6 0.4
C5 B:CIT302 3.4 29.0 0.4
C6 B:CIT302 3.6 35.0 0.4
O3 B:CIT302 3.8 26.3 0.4
O B:HOH408 4.0 32.8 1.0
O6 B:CIT302 4.0 24.9 0.4
O2 B:CIT302 4.1 20.1 0.4
O B:HOH455 4.1 35.3 1.0
NH2 B:ARG34 4.1 19.4 1.0
ND2 B:ASN39 4.4 26.6 1.0
O4 B:CIT302 4.5 32.6 0.4
O B:HOH444 4.5 36.2 1.0
O5 B:CIT302 4.7 34.6 0.4
CB B:ARG36 4.7 22.9 1.0
O B:HOH401 4.9 34.8 1.0
O B:CYS37 4.9 18.0 1.0

Reference:

J.A.Blanco, E.Boix, M.Moussaoui, V.A.Salazar. Structure of Ecp in Complex with Citrate Ions at 1.50 Angstroms To Be Published.
Page generated: Sun Dec 13 15:43:59 2020

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