Iron in PDB 4wg2: P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst
Enzymatic activity of P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst
All present enzymatic activity of P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst:
1.14.14.1;
1.6.2.4;
Protein crystallography data
The structure of P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst, PDB code: 4wg2
was solved by
T.K.Hyster,
C.C.Farwell,
A.R.Buller,
J.A.Mcintosh,
F.H.Arnold,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Resolution Low / High (Å)
|
40.00 /
2.66
|
Space group
|
P 42 21 2
|
Cell size a, b, c (Å), α, β, γ (°)
|
206.897,
206.897,
119.385,
90.00,
90.00,
90.00
|
R / Rfree (%)
|
19.7 /
23.5
|
Iron Binding Sites:
The binding sites of Iron atom in the P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst
(pdb code 4wg2). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 3 binding sites of Iron where determined in the
P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst, PDB code: 4wg2:
Jump to Iron binding site number:
1;
2;
3;
Iron binding site 1 out
of 3 in 4wg2
Go back to
Iron Binding Sites List in 4wg2
Iron binding site 1 out
of 3 in the P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe603
b:34.3
occ:1.00
|
FE
|
A:HEM603
|
0.0
|
34.3
|
1.0
|
ND
|
A:HEM603
|
1.9
|
32.3
|
1.0
|
NA
|
A:HEM603
|
2.0
|
34.0
|
1.0
|
OG
|
A:SER400
|
2.0
|
38.2
|
1.0
|
NC
|
A:HEM603
|
2.1
|
32.9
|
1.0
|
NB
|
A:HEM603
|
2.1
|
33.5
|
1.0
|
C1D
|
A:HEM603
|
2.9
|
32.9
|
1.0
|
C4D
|
A:HEM603
|
2.9
|
32.0
|
1.0
|
C4C
|
A:HEM603
|
3.0
|
34.3
|
1.0
|
CB
|
A:SER400
|
3.0
|
37.6
|
1.0
|
C1A
|
A:HEM603
|
3.0
|
33.1
|
1.0
|
C4B
|
A:HEM603
|
3.0
|
34.0
|
1.0
|
C1B
|
A:HEM603
|
3.1
|
34.1
|
1.0
|
C4A
|
A:HEM603
|
3.1
|
33.3
|
1.0
|
C1C
|
A:HEM603
|
3.1
|
33.1
|
1.0
|
CHD
|
A:HEM603
|
3.3
|
34.5
|
1.0
|
CHA
|
A:HEM603
|
3.4
|
31.9
|
1.0
|
CHC
|
A:HEM603
|
3.4
|
33.2
|
1.0
|
CHB
|
A:HEM603
|
3.5
|
32.5
|
1.0
|
CA
|
A:SER400
|
3.9
|
37.6
|
1.0
|
C2D
|
A:HEM603
|
4.1
|
31.8
|
1.0
|
C3D
|
A:HEM603
|
4.1
|
31.9
|
1.0
|
C3C
|
A:HEM603
|
4.2
|
34.0
|
1.0
|
C2A
|
A:HEM603
|
4.2
|
34.1
|
1.0
|
C3A
|
A:HEM603
|
4.2
|
35.0
|
1.0
|
C2C
|
A:HEM603
|
4.2
|
35.3
|
1.0
|
C2B
|
A:HEM603
|
4.3
|
34.4
|
1.0
|
C3B
|
A:HEM603
|
4.3
|
34.5
|
1.0
|
N
|
A:GLY402
|
4.4
|
37.9
|
1.0
|
CA
|
A:GLY402
|
4.7
|
38.3
|
1.0
|
C
|
A:SER400
|
4.7
|
37.6
|
1.0
|
N
|
A:ILE401
|
4.9
|
37.5
|
1.0
|
|
Iron binding site 2 out
of 3 in 4wg2
Go back to
Iron Binding Sites List in 4wg2
Iron binding site 2 out
of 3 in the P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe500
b:44.8
occ:1.00
|
FE
|
B:HEM500
|
0.0
|
44.8
|
1.0
|
ND
|
B:HEM500
|
1.9
|
44.2
|
1.0
|
NA
|
B:HEM500
|
2.0
|
43.4
|
1.0
|
OG
|
B:SER400
|
2.1
|
48.8
|
1.0
|
NB
|
B:HEM500
|
2.1
|
39.9
|
1.0
|
NC
|
B:HEM500
|
2.1
|
43.1
|
1.0
|
C1D
|
B:HEM500
|
2.9
|
43.8
|
1.0
|
C4D
|
B:HEM500
|
2.9
|
44.9
|
1.0
|
C1A
|
B:HEM500
|
3.0
|
44.0
|
1.0
|
C1B
|
B:HEM500
|
3.0
|
42.5
|
1.0
|
C4C
|
B:HEM500
|
3.0
|
46.1
|
1.0
|
C4A
|
B:HEM500
|
3.0
|
44.2
|
1.0
|
C4B
|
B:HEM500
|
3.0
|
41.7
|
1.0
|
C1C
|
B:HEM500
|
3.1
|
40.7
|
1.0
|
CB
|
B:SER400
|
3.1
|
45.9
|
1.0
|
CHA
|
B:HEM500
|
3.4
|
43.8
|
1.0
|
CHD
|
B:HEM500
|
3.4
|
46.8
|
1.0
|
CHB
|
B:HEM500
|
3.4
|
45.4
|
1.0
|
CHC
|
B:HEM500
|
3.5
|
40.9
|
1.0
|
CA
|
B:SER400
|
4.0
|
45.1
|
1.0
|
C2D
|
B:HEM500
|
4.1
|
43.3
|
1.0
|
C3D
|
B:HEM500
|
4.2
|
43.2
|
1.0
|
C2A
|
B:HEM500
|
4.2
|
46.0
|
1.0
|
C3A
|
B:HEM500
|
4.2
|
46.4
|
1.0
|
C3C
|
B:HEM500
|
4.2
|
45.0
|
1.0
|
C2B
|
B:HEM500
|
4.2
|
40.6
|
1.0
|
C2C
|
B:HEM500
|
4.3
|
42.8
|
1.0
|
C3B
|
B:HEM500
|
4.3
|
40.3
|
1.0
|
N
|
B:GLY402
|
4.6
|
41.3
|
1.0
|
CA
|
B:GLY402
|
4.8
|
42.5
|
1.0
|
C
|
B:SER400
|
4.9
|
43.5
|
1.0
|
CB
|
B:ALA264
|
5.0
|
64.7
|
1.0
|
|
Iron binding site 3 out
of 3 in 4wg2
Go back to
Iron Binding Sites List in 4wg2
Iron binding site 3 out
of 3 in the P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst
Mono view
Stereo pair view
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of P411BM3-Cis T438S I263F Regioselective C-H Amination Catalyst within 5.0Å range:
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe602
b:38.3
occ:1.00
|
FE
|
C:HEM602
|
0.0
|
38.3
|
1.0
|
ND
|
C:HEM602
|
1.9
|
35.9
|
1.0
|
NA
|
C:HEM602
|
2.0
|
35.0
|
1.0
|
NC
|
C:HEM602
|
2.1
|
34.2
|
1.0
|
NB
|
C:HEM602
|
2.1
|
31.1
|
1.0
|
OG
|
C:SER400
|
2.1
|
49.2
|
1.0
|
C4D
|
C:HEM602
|
2.9
|
36.7
|
1.0
|
C1D
|
C:HEM602
|
2.9
|
36.1
|
1.0
|
C1A
|
C:HEM602
|
3.0
|
37.1
|
1.0
|
C4C
|
C:HEM602
|
3.0
|
35.2
|
1.0
|
C4B
|
C:HEM602
|
3.0
|
31.3
|
1.0
|
C1B
|
C:HEM602
|
3.0
|
32.3
|
1.0
|
C4A
|
C:HEM602
|
3.0
|
36.0
|
1.0
|
C1C
|
C:HEM602
|
3.1
|
33.4
|
1.0
|
CB
|
C:SER400
|
3.2
|
46.4
|
1.0
|
CHA
|
C:HEM602
|
3.3
|
36.2
|
1.0
|
CHD
|
C:HEM602
|
3.3
|
36.1
|
1.0
|
CHB
|
C:HEM602
|
3.4
|
35.1
|
1.0
|
CHC
|
C:HEM602
|
3.4
|
32.5
|
1.0
|
CA
|
C:SER400
|
3.9
|
46.5
|
1.0
|
C2D
|
C:HEM602
|
4.1
|
37.2
|
1.0
|
C3D
|
C:HEM602
|
4.1
|
38.9
|
1.0
|
C2A
|
C:HEM602
|
4.2
|
39.3
|
1.0
|
C3A
|
C:HEM602
|
4.2
|
39.5
|
1.0
|
C3C
|
C:HEM602
|
4.2
|
34.3
|
1.0
|
C2C
|
C:HEM602
|
4.2
|
33.2
|
1.0
|
C2B
|
C:HEM602
|
4.2
|
30.5
|
1.0
|
C3B
|
C:HEM602
|
4.3
|
31.0
|
1.0
|
N
|
C:GLY402
|
4.7
|
44.7
|
1.0
|
C
|
C:SER400
|
4.8
|
46.3
|
1.0
|
O
|
C:ALA264
|
4.9
|
67.2
|
1.0
|
CA
|
C:GLY402
|
5.0
|
45.1
|
1.0
|
N
|
C:ILE401
|
5.0
|
45.3
|
1.0
|
CB
|
C:ALA264
|
5.0
|
65.9
|
1.0
|
|
Reference:
T.K.Hyster,
C.C.Farwell,
A.R.Buller,
J.A.Mcintosh,
F.H.Arnold.
Enzyme-Controlled Nitrogen-Atom Transfer Enables Regiodivergent C-H Amination. J.Am.Chem.Soc. V. 136 15505 2014.
ISSN: ESSN 1520-5126
PubMed: 25325618
DOI: 10.1021/JA509308V
Page generated: Mon Aug 5 14:22:19 2024
|