Iron in PDB 4wpz: Crystal Structure of Cytochrome P450 CYP107W1 From Streptomyces Avermitilis

The structure of Crystal Structure of Cytochrome P450 CYP107W1 From Streptomyces Avermitilis, PDB code: 4wpz was solved by L.W.Kang, D.H.Kim, T.V.Pham, S.H.Han, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	35.54 / 2.10
Space group	P 43 21 2
Cell size a, b, c (Å), α, β, γ (°)	114.877, 114.877, 79.049, 90.00, 90.00, 90.00
R / Rfree (%)	17.8 / 24

The structure of Crystal Structure of Cytochrome P450 CYP107W1 From Streptomyces Avermitilis also contains other interesting chemical elements:

Potassium

(K)

2 atoms

The binding sites of Iron atom in the Crystal Structure of Cytochrome P450 CYP107W1 From Streptomyces Avermitilis (pdb code 4wpz). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Cytochrome P450 CYP107W1 From Streptomyces Avermitilis, PDB code: 4wpz:

Iron binding site 1 out of 1 in the Crystal Structure of Cytochrome P450 CYP107W1 From Streptomyces Avermitilis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome P450 CYP107W1 From Streptomyces Avermitilis within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe503 b:17.4 occ:1.00 FE A:HEM503 0.0 17.4 1.0 NB A:HEM503 2.1 14.9 1.0 ND A:HEM503 2.1 17.2 1.0 NC A:HEM503 2.1 15.5 1.0 NA A:HEM503 2.1 17.1 1.0 SG A:CYS353 2.5 18.0 1.0 O A:HOH722 2.8 31.6 1.0 C4B A:HEM503 3.0 14.0 1.0 C1A A:HEM503 3.1 16.1 1.0 C1C A:HEM503 3.1 14.6 1.0 C4D A:HEM503 3.1 15.2 1.0 C4A A:HEM503 3.1 16.7 1.0 C4C A:HEM503 3.1 15.1 1.0 C1D A:HEM503 3.1 15.2 1.0 C1B A:HEM503 3.1 15.8 1.0 CHA A:HEM503 3.4 16.1 1.0 CHC A:HEM503 3.4 15.2 1.0 CHD A:HEM503 3.5 14.2 1.0 CHB A:HEM503 3.5 15.2 1.0 CB A:CYS353 3.5 15.1 1.0 CA A:CYS353 4.1 14.7 1.0 C3B A:HEM503 4.3 15.1 1.0 C3C A:HEM503 4.3 16.8 1.0 C2A A:HEM503 4.4 16.4 1.0 C3A A:HEM503 4.4 14.9 1.0 C3D A:HEM503 4.4 16.0 1.0 C2C A:HEM503 4.4 14.9 1.0 O A:ALA239 4.4 16.1 1.0 C2D A:HEM503 4.4 14.9 1.0 C2B A:HEM503 4.4 14.9 1.0 CB A:ALA239 4.5 20.3 1.0 N A:GLY355 4.7 15.9 1.0 N A:LEU354 4.8 14.8 1.0 C A:CYS353 4.8 15.2 1.0 C A:ALA239 4.9 16.7 1.0 O A:HOH805 4.9 38.0 1.0

S.Han, T.V.Pham, J.H.Kim, Y.R.Lim, H.G.Park, G.S.Cha, C.H.Yun, Y.J.Chun, L.W.Kang, D.Kim. Functional Characterization of CYP107W1 From Streptomyces Avermitilis and Biosynthesis of Macrolide Oligomycin A. Arch.Biochem.Biophys. V. 575 1 2015.
ISSN: ESSN 1096-0384
PubMed: 25849761
DOI: 10.1016/J.ABB.2015.03.025