Iron in PDB 4zid: Dimeric Hydrogenobacter Thermophilus Cytochrome C552 Obtained From Escherichia Coli

The structure of Dimeric Hydrogenobacter Thermophilus Cytochrome C552 Obtained From Escherichia Coli, PDB code: 4zid was solved by Y.Hayashi, M.Yamanaka, S.Nagao, H.Komori, Y.Higuchi, S.Hirota, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	39.67 / 1.80
Space group	P 31 2 1
Cell size a, b, c (Å), α, β, γ (°)	45.808, 45.808, 78.304, 90.00, 90.00, 120.00
R / Rfree (%)	16.7 / 20.4

The binding sites of Iron atom in the Dimeric Hydrogenobacter Thermophilus Cytochrome C552 Obtained From Escherichia Coli (pdb code 4zid). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Dimeric Hydrogenobacter Thermophilus Cytochrome C552 Obtained From Escherichia Coli, PDB code: 4zid:

Iron binding site 1 out of 1 in the Dimeric Hydrogenobacter Thermophilus Cytochrome C552 Obtained From Escherichia Coli


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Dimeric Hydrogenobacter Thermophilus Cytochrome C552 Obtained From Escherichia Coli within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe101 b:23.8 occ:1.00 FE A:HEC101 0.0 23.8 1.0 NA A:HEC101 1.9 22.2 1.0 NB A:HEC101 2.0 22.9 1.0 NC A:HEC101 2.0 26.5 1.0 NE2 A:HIS14 2.0 23.0 1.0 ND A:HEC101 2.1 23.9 1.0 CE1 A:HIS14 2.9 25.6 1.0 C4B A:HEC101 3.0 25.2 1.0 C1C A:HEC101 3.0 25.9 1.0 C4A A:HEC101 3.0 20.7 1.0 C1A A:HEC101 3.0 26.5 1.0 C1B A:HEC101 3.1 20.9 1.0 C1D A:HEC101 3.1 24.8 1.0 C4C A:HEC101 3.1 26.5 1.0 CD2 A:HIS14 3.1 26.1 1.0 C4D A:HEC101 3.1 25.9 1.0 CHC A:HEC101 3.3 26.1 1.0 CHB A:HEC101 3.4 22.0 1.0 CHA A:HEC101 3.5 23.7 1.0 CHD A:HEC101 3.5 24.9 1.0 ND1 A:HIS14 4.0 26.1 1.0 CG A:HIS14 4.2 25.5 1.0 C2A A:HEC101 4.2 25.9 1.0 C2C A:HEC101 4.3 25.4 1.0 C3B A:HEC101 4.3 24.1 1.0 C3C A:HEC101 4.3 26.5 1.0 C2D A:HEC101 4.3 23.0 1.0 C2B A:HEC101 4.3 23.9 1.0 C3A A:HEC101 4.3 23.8 1.0 C3D A:HEC101 4.3 22.6 1.0

Y.Hayashi, M.Yamanaka, S.Nagao, H.Komori, Y.Higuchi, S.Hirota. Domain Swapping Oligomerization of Thermostable C-Type Cytochrome in E. Coli Cells Sci Rep V. 6 19334 2016.
ISSN: ESSN 2045-2322
PubMed: 26838805
DOI: 10.1038/SREP19334