Iron in PDB 5abr: Structure of Fesi Protein From Azotobacter Vinelandii

The structure of Structure of Fesi Protein From Azotobacter Vinelandii, PDB code: 5abr was solved by B.Kabasakal, J.W.Murray, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	42.934 / 2.11
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	39.040, 60.100, 45.510, 90.00, 109.37, 90.00
R / Rfree (%)	17.74 / 23.07

The binding sites of Iron atom in the Structure of Fesi Protein From Azotobacter Vinelandii (pdb code 5abr). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Structure of Fesi Protein From Azotobacter Vinelandii, PDB code: 5abr:
Jump to Iron binding site number: 1; 2; 3; 4;

Iron binding site 1 out of 4 in the Structure of Fesi Protein From Azotobacter Vinelandii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of Fesi Protein From Azotobacter Vinelandii within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe500 b:23.2 occ:1.00 FE1 A:FES500 0.0 23.2 1.0 S1 A:FES500 2.2 21.9 1.0 S2 A:FES500 2.2 27.1 1.0 SG A:CYS11 2.3 27.0 1.0 SG A:CYS24 2.4 25.2 1.0 FE2 A:FES500 2.8 22.8 1.0 CB A:CYS11 3.2 27.2 1.0 CB A:CYS24 3.3 25.2 1.0 N A:CYS24 3.9 26.9 1.0 CA A:CYS56 4.2 27.9 1.0 CA A:CYS24 4.2 26.8 1.0 N A:LEU57 4.2 27.4 1.0 ND2 A:ASN65 4.3 25.5 1.0 O A:HOH2018 4.4 47.9 1.0 CB A:GLN13 4.4 29.4 1.0 CA A:CYS11 4.6 25.1 1.0 SG A:CYS56 4.6 29.2 1.0 CB A:CYS56 4.8 28.9 1.0 SG A:CYS60 4.8 30.2 1.0 C A:CYS56 4.8 27.7 1.0 C A:CYS11 4.8 26.4 1.0 CA A:CYS60 4.8 31.6 1.0 CB A:ASN65 4.9 24.6 1.0 C A:SER23 5.0 29.2 1.0

Iron binding site 2 out of 4 in the Structure of Fesi Protein From Azotobacter Vinelandii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of Fesi Protein From Azotobacter Vinelandii within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe500 b:22.8 occ:1.00 FE2 A:FES500 0.0 22.8 1.0 S1 A:FES500 2.2 21.9 1.0 S2 A:FES500 2.2 27.1 1.0 SG A:CYS56 2.3 29.2 1.0 SG A:CYS60 2.3 30.2 1.0 FE1 A:FES500 2.8 23.2 1.0 CB A:CYS56 3.3 28.9 1.0 CB A:CYS60 3.5 32.1 1.0 CA A:CYS56 3.6 27.9 1.0 CA A:CYS60 3.7 31.6 1.0 N A:CYS60 3.9 31.5 1.0 N A:LEU57 4.0 27.4 1.0 N A:GLY58 4.0 28.7 1.0 NH1 A:ARG15 4.0 27.3 1.0 C A:CYS56 4.2 27.7 1.0 NH2 A:ARG15 4.3 29.5 1.0 C A:GLY58 4.3 30.4 1.0 O A:GLY58 4.3 31.6 1.0 SG A:CYS11 4.4 27.0 1.0 CA A:GLY58 4.5 29.1 1.0 CZ A:ARG15 4.6 28.6 1.0 SG A:CYS24 4.7 25.2 1.0 C A:PRO59 4.7 32.2 1.0 N A:PRO59 4.7 31.1 1.0 N A:CYS56 4.9 27.2 1.0 C A:LEU57 5.0 28.0 1.0

Iron binding site 3 out of 4 in the Structure of Fesi Protein From Azotobacter Vinelandii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Structure of Fesi Protein From Azotobacter Vinelandii within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe500 b:23.0 occ:1.00 FE1 B:FES500 0.0 23.0 1.0 S2 B:FES500 2.2 25.5 1.0 S1 B:FES500 2.2 21.6 1.0 SG B:CYS24 2.3 27.6 1.0 SG B:CYS11 2.4 24.3 1.0 FE2 B:FES500 2.7 22.5 1.0 CB B:CYS24 3.3 26.5 1.0 CB B:CYS11 3.3 23.7 1.0 N B:CYS24 3.9 27.2 1.0 O B:HOH2017 4.0 58.3 1.0 CA B:CYS24 4.1 27.1 1.0 ND2 B:ASN65 4.2 25.5 1.0 N B:LEU57 4.3 27.9 1.0 CA B:CYS56 4.4 27.9 1.0 SG B:CYS56 4.6 28.7 1.0 CA B:CYS60 4.6 30.4 1.0 CB B:GLN13 4.6 27.4 1.0 CA B:CYS11 4.7 24.2 1.0 CB B:CYS56 4.7 28.6 1.0 SG B:CYS60 4.7 30.6 1.0 C B:CYS11 4.9 25.6 1.0 C B:CYS56 5.0 28.2 1.0 CB B:ASN65 5.0 25.1 1.0

Iron binding site 4 out of 4 in the Structure of Fesi Protein From Azotobacter Vinelandii


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Structure of Fesi Protein From Azotobacter Vinelandii within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe500 b:22.5 occ:1.00 FE2 B:FES500 0.0 22.5 1.0 S2 B:FES500 2.2 25.5 1.0 S1 B:FES500 2.2 21.6 1.0 SG B:CYS60 2.3 30.6 1.0 SG B:CYS56 2.4 28.7 1.0 FE1 B:FES500 2.7 23.0 1.0 CB B:CYS60 3.4 30.9 1.0 CB B:CYS56 3.4 28.6 1.0 CA B:CYS60 3.5 30.4 1.0 N B:CYS60 3.8 31.1 1.0 CA B:CYS56 3.9 27.9 1.0 NH1 B:ARG15 4.0 26.8 1.0 N B:LEU57 4.0 27.9 1.0 NH2 B:ARG15 4.1 29.3 1.0 N B:GLY58 4.1 28.1 1.0 O B:GLY58 4.3 28.5 1.0 C B:GLY58 4.4 29.2 1.0 C B:CYS56 4.4 28.2 1.0 SG B:CYS11 4.4 24.3 1.0 CZ B:ARG15 4.5 28.4 1.0 C B:PRO59 4.6 31.4 1.0 CA B:GLY58 4.7 28.6 1.0 O B:HOH2017 4.7 58.3 1.0 SG B:CYS24 4.7 27.6 1.0 N B:PRO59 4.8 29.4 1.0 C B:CYS60 4.9 30.8 1.0

B.Kabasakal, C.A.R.Cotton, J.W.Murray. Structure of Fesi Protein From Azotobacter Vinelandii To Be Published.