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Iron in PDB 5aur: Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region
Protein crystallography data
The structure of Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region, PDB code: 5aur
was solved by
C.Ren,
S.Nagao,
M.Yamanaka,
H.Kamikubo,
H.Komori,
Y.Shomura,
Y.Higuchi,
S.Hirota,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 50.00 / 1.26 |
| Space group | P 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 32.850, 42.898, 53.591, 86.73, 86.51, 89.83 |
| R / Rfree (%) | 18.1 / 22.9 |
Other elements in 5aur:
The structure of Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region also contains other interesting chemical elements:
| Iodine | (I) | 11 atoms |
Iron Binding Sites:
The binding sites of Iron atom in the Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region
(pdb code 5aur). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region, PDB code: 5aur:
Jump to Iron binding site number: 1; 2; 3; 4;
In total 4 binding sites of Iron where determined in the Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region, PDB code: 5aur:
Jump to Iron binding site number: 1; 2; 3; 4;
Iron binding site 1 out of 4 in 5aur
Go back to
Iron Binding Sites List in 5aur
Iron binding site 1 out
of 4 in the Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region within 5.0Å range:
|
Iron binding site 2 out of 4 in 5aur
Go back to
Iron Binding Sites List in 5aur
Iron binding site 2 out
of 4 in the Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region within 5.0Å range:
|
Iron binding site 3 out of 4 in 5aur
Go back to
Iron Binding Sites List in 5aur
Iron binding site 3 out
of 4 in the Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region within 5.0Å range:
|
Iron binding site 4 out of 4 in 5aur
Go back to
Iron Binding Sites List in 5aur
Iron binding site 4 out
of 4 in the Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Hydrogenobacter Thermophilus Cytochrome C552 Dimer Formed By Domain Swapping at N-Terminal Region within 5.0Å range:
|
Reference:
C.Ren,
S.Nagao,
M.Yamanaka,
H.Komori,
Y.Shomura,
Y.Higuchi,
S.Hirota.
Oligomerization Enhancement and Two Domain Swapping Mode Detection For Thermostable Cytochrome C552VIA the Elongation of the Major Hinge Loop. Mol Biosyst V. 11 3218 2015.
ISSN: ESSN 1742-2051
PubMed: 26451671
DOI: 10.1039/C5MB00545K
Page generated: Mon Aug 5 19:42:55 2024
ISSN: ESSN 1742-2051
PubMed: 26451671
DOI: 10.1039/C5MB00545K
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