Iron in PDB 5cwe: Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid

The structure of Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid, PDB code: 5cwe was solved by T.-V.Pham, S.-H.Han, J.-H.Kim, D.-H.Kim, L.-W.Kang, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	47.43 / 2.39
Space group	P 1 21 1
Cell size a, b, c (Å), α, β, γ (°)	64.080, 118.371, 66.039, 90.00, 105.51, 90.00
R / Rfree (%)	22.6 / 30.1

The binding sites of Iron atom in the Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid (pdb code 5cwe). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid, PDB code: 5cwe:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe403 b:26.2 occ:1.00 FE A:HEM403 0.0 26.2 1.0 ND A:HEM403 1.9 24.1 1.0 NA A:HEM403 2.0 21.6 1.0 NB A:HEM403 2.0 22.4 1.0 NC A:HEM403 2.1 23.9 1.0 SG A:CYS344 2.1 32.2 1.0 C1D A:HEM403 2.9 25.0 1.0 C4D A:HEM403 3.0 22.2 1.0 C4A A:HEM403 3.0 21.4 1.0 C1B A:HEM403 3.0 24.3 1.0 C4C A:HEM403 3.0 22.6 1.0 C1A A:HEM403 3.0 23.9 1.0 C4B A:HEM403 3.0 24.2 1.0 C1C A:HEM403 3.1 26.0 1.0 CHD A:HEM403 3.3 22.0 1.0 CHB A:HEM403 3.3 21.4 1.0 CHA A:HEM403 3.4 22.6 1.0 CB A:CYS344 3.4 33.7 1.0 CHC A:HEM403 3.5 26.0 1.0 CA A:CYS344 4.0 32.5 1.0 O2 A:DAO402 4.2 62.4 1.0 C2D A:HEM403 4.2 24.8 1.0 C3A A:HEM403 4.2 22.8 1.0 C3D A:HEM403 4.2 23.9 1.0 C2A A:HEM403 4.2 24.5 1.0 C2B A:HEM403 4.2 24.6 1.0 C3C A:HEM403 4.2 24.1 1.0 C3B A:HEM403 4.3 25.5 1.0 C2C A:HEM403 4.3 24.7 1.0 C1 A:DAO402 4.6 62.9 1.0 O1 A:DAO402 4.6 55.6 1.0 N A:LEU345 4.7 33.9 1.0 N A:GLY346 4.8 30.2 1.0 C A:CYS344 4.8 32.4 1.0 CB A:ALA233 4.9 33.0 1.0

Iron binding site 2 out of 2 in the Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe403 b:22.3 occ:1.00 FE B:HEM403 0.0 22.3 1.0 ND B:HEM403 1.9 21.8 1.0 NA B:HEM403 2.0 19.2 1.0 NB B:HEM403 2.1 21.0 1.0 NC B:HEM403 2.1 19.2 1.0 SG B:CYS344 2.2 26.5 1.0 C4D B:HEM403 2.9 22.9 1.0 C1D B:HEM403 2.9 24.3 1.0 C1B B:HEM403 3.0 23.1 1.0 C1A B:HEM403 3.0 20.7 1.0 C4A B:HEM403 3.0 18.7 1.0 C4C B:HEM403 3.0 20.6 1.0 C4B B:HEM403 3.0 22.2 1.0 C1C B:HEM403 3.1 20.8 1.0 CHA B:HEM403 3.3 21.9 1.0 CHB B:HEM403 3.4 20.9 1.0 CHD B:HEM403 3.4 22.8 1.0 CHC B:HEM403 3.4 22.7 1.0 CB B:CYS344 3.5 25.2 1.0 O2 B:DAO402 4.1 53.9 1.0 C2D B:HEM403 4.2 26.4 1.0 C3D B:HEM403 4.2 26.2 1.0 C2A B:HEM403 4.2 21.9 1.0 C3A B:HEM403 4.2 21.1 1.0 C2B B:HEM403 4.2 24.2 1.0 CA B:CYS344 4.2 25.4 1.0 C3C B:HEM403 4.2 22.6 1.0 C3B B:HEM403 4.3 24.5 1.0 C2C B:HEM403 4.3 22.4 1.0 N B:GLY346 4.6 26.9 1.0 CB B:ALA233 4.7 37.2 1.0 N B:LEU345 4.8 25.9 1.0 C1 B:DAO402 4.9 57.4 1.0 O B:ALA233 4.9 40.1 1.0 C B:CYS344 4.9 26.6 1.0 O1 B:DAO402 5.0 60.5 1.0

T.-V.Pham, S.-H.Han, J.-H.Kim, D.-H.Kim, L.-W.Kang. Structure of CYP107L2 From Streptomyces Avermitilis with Lauric Acid To Be Published.