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PDB 5da5-5eaw »
5e79 »
Iron in PDB 5e79: Macromolecular Diffractive Imaging Using Imperfect Crystals
Enzymatic activity of Macromolecular Diffractive Imaging Using Imperfect Crystals
All present enzymatic activity of Macromolecular Diffractive Imaging Using Imperfect Crystals:
1.10.3.9;
1.10.3.9;
Protein crystallography data
The structure of Macromolecular Diffractive Imaging Using Imperfect Crystals, PDB code: 5e79
was solved by
K.Ayyer,
O.Yefanov,
D.Oberthur,
S.Roy-Chowdhury,
L.Galli,
V.Mariani,
S.Basu,
J.Coe,
C.E.Conrad,
R.Fromme,
A.Schaffer,
K.Dorner,
D.James,
C.Kupitz,
M.Metz,
G.Nelson,
P.L.Xavier,
K.R.Beyerlein,
M.Schmidt,
I.Sarrou,
J.C.H.Spence,
U.Weierstall,
T.A.White,
J.-H.Yang,
Y.Zhao,
M.Liang,
A.Aquila,
M.S.Hunter,
J.E.Koglin,
S.Boutet,
P.Fromme,
A.Barty,
H.N.Chapman,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 29.98 / 3.50 |
| Space group | P 1 |
| Cell size a, b, c (Å), α, β, γ (°) | 250.800, 250.800, 250.800, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 32.4 / 33.1 |
Other elements in 5e79:
The structure of Macromolecular Diffractive Imaging Using Imperfect Crystals also contains other interesting chemical elements:
| Magnesium | (Mg) | 74 atoms |
| Manganese | (Mn) | 8 atoms |
| Calcium | (Ca) | 8 atoms |
| Chlorine | (Cl) | 6 atoms |
Iron Binding Sites:
The binding sites of Iron atom in the Macromolecular Diffractive Imaging Using Imperfect Crystals
(pdb code 5e79). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 6 binding sites of Iron where determined in the Macromolecular Diffractive Imaging Using Imperfect Crystals, PDB code: 5e79:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Iron where determined in the Macromolecular Diffractive Imaging Using Imperfect Crystals, PDB code: 5e79:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;
Iron binding site 1 out of 6 in 5e79
Go back to
Iron Binding Sites List in 5e79
Iron binding site 1 out
of 6 in the Macromolecular Diffractive Imaging Using Imperfect Crystals
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Macromolecular Diffractive Imaging Using Imperfect Crystals within 5.0Å range:
|
Iron binding site 2 out of 6 in 5e79
Go back to
Iron Binding Sites List in 5e79
Iron binding site 2 out
of 6 in the Macromolecular Diffractive Imaging Using Imperfect Crystals
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Macromolecular Diffractive Imaging Using Imperfect Crystals within 5.0Å range:
|
Iron binding site 3 out of 6 in 5e79
Go back to
Iron Binding Sites List in 5e79
Iron binding site 3 out
of 6 in the Macromolecular Diffractive Imaging Using Imperfect Crystals
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Macromolecular Diffractive Imaging Using Imperfect Crystals within 5.0Å range:
|
Iron binding site 4 out of 6 in 5e79
Go back to
Iron Binding Sites List in 5e79
Iron binding site 4 out
of 6 in the Macromolecular Diffractive Imaging Using Imperfect Crystals
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Macromolecular Diffractive Imaging Using Imperfect Crystals within 5.0Å range:
|
Iron binding site 5 out of 6 in 5e79
Go back to
Iron Binding Sites List in 5e79
Iron binding site 5 out
of 6 in the Macromolecular Diffractive Imaging Using Imperfect Crystals
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Macromolecular Diffractive Imaging Using Imperfect Crystals within 5.0Å range:
|
Iron binding site 6 out of 6 in 5e79
Go back to
Iron Binding Sites List in 5e79
Iron binding site 6 out
of 6 in the Macromolecular Diffractive Imaging Using Imperfect Crystals
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Macromolecular Diffractive Imaging Using Imperfect Crystals within 5.0Å range:
|
Reference:
K.Ayyer,
O.M.Yefanov,
D.Oberthur,
S.Roy-Chowdhury,
L.Galli,
V.Mariani,
S.Basu,
J.Coe,
C.E.Conrad,
R.Fromme,
A.Schaffer,
K.Dorner,
D.James,
C.Kupitz,
M.Metz,
G.Nelson,
P.L.Xavier,
K.R.Beyerlein,
M.Schmidt,
I.Sarrou,
J.C.Spence,
U.Weierstall,
T.A.White,
J.H.Yang,
Y.Zhao,
M.Liang,
A.Aquila,
M.S.Hunter,
J.S.Robinson,
J.E.Koglin,
S.Boutet,
P.Fromme,
A.Barty,
H.N.Chapman.
Macromolecular Diffractive Imaging Using Imperfect Crystals. Nature V. 530 202 2016.
ISSN: ESSN 1476-4687
PubMed: 26863980
DOI: 10.1038/NATURE16949
Page generated: Sun Dec 13 15:59:54 2020
ISSN: ESSN 1476-4687
PubMed: 26863980
DOI: 10.1038/NATURE16949
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