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Iron in PDB 5efv: The Host-Recognition Device of Staphylococcus Aureus Phage PHI11

Protein crystallography data

The structure of The Host-Recognition Device of Staphylococcus Aureus Phage PHI11, PDB code: 5efv was solved by C.Koc, P.Kuhner, G.Xia, S.Spinelli, A.Roussel, C.Cambillau, T.Stehle, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 44.40 / 2.20
Space group P 1
Cell size a, b, c (Å), α, β, γ (°) 87.060, 89.010, 93.260, 93.02, 105.25, 117.58
R / Rfree (%) 17.3 / 21.1

Iron Binding Sites:

The binding sites of Iron atom in the The Host-Recognition Device of Staphylococcus Aureus Phage PHI11 (pdb code 5efv). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the The Host-Recognition Device of Staphylococcus Aureus Phage PHI11, PDB code: 5efv:

Iron binding site 1 out of 1 in 5efv

Go back to Iron Binding Sites List in 5efv
Iron binding site 1 out of 1 in the The Host-Recognition Device of Staphylococcus Aureus Phage PHI11


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Host-Recognition Device of Staphylococcus Aureus Phage PHI11 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe701

b:33.6
occ:1.00
NE2 B:HIS50 2.2 34.5 1.0
NE2 C:HIS50 2.2 33.3 1.0
NE2 A:HIS50 2.2 30.5 1.0
NE2 A:HIS42 2.3 30.2 1.0
NE2 B:HIS42 2.3 39.6 1.0
NE2 C:HIS42 2.3 35.8 1.0
CE1 B:HIS50 3.2 34.8 1.0
CD2 B:HIS50 3.2 34.8 1.0
CD2 A:HIS50 3.2 30.5 1.0
CD2 C:HIS50 3.2 33.4 1.0
CE1 C:HIS50 3.2 33.5 1.0
CD2 A:HIS42 3.2 30.4 1.0
CD2 B:HIS42 3.2 39.3 1.0
CD2 C:HIS42 3.2 36.5 1.0
CE1 A:HIS50 3.3 30.4 1.0
CE1 A:HIS42 3.3 29.6 1.0
CE1 B:HIS42 3.3 39.4 1.0
CE1 C:HIS42 3.3 35.8 1.0
CG B:HIS50 4.3 34.3 1.0
CG A:HIS42 4.3 30.2 1.0
ND1 B:HIS50 4.3 35.8 1.0
CG B:HIS42 4.3 38.5 1.0
CG C:HIS50 4.3 33.1 1.0
CG A:HIS50 4.3 31.2 1.0
ND1 C:HIS50 4.4 34.3 1.0
ND1 A:HIS42 4.4 31.2 1.0
CG C:HIS42 4.4 36.0 1.0
ND1 B:HIS42 4.4 39.8 1.0
ND1 A:HIS50 4.4 31.9 1.0
ND1 C:HIS42 4.4 36.7 1.0

Reference:

C.Koc, G.Xia, P.Kuhner, S.Spinelli, A.Roussel, C.Cambillau, T.Stehle. Structure of the Host-Recognition Device of Staphylococcus Aureus Phage 11. Sci Rep V. 6 27581 2016.
ISSN: ESSN 2045-2322
PubMed: 27282779
DOI: 10.1038/SREP27581
Page generated: Tue Aug 6 00:27:25 2024

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