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Iron in PDB 5ezw: Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant

Enzymatic activity of Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant

All present enzymatic activity of Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant:
1.13.11.20;

Protein crystallography data

The structure of Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant, PDB code: 5ezw was solved by M.Fellner, E.P.Tchesnokov, G.N.L.Jameson, S.M.Wilbanks, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 26.12 / 1.65
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 57.750, 57.750, 122.420, 90.00, 90.00, 90.00
R / Rfree (%) 17.2 / 19.2

Iron Binding Sites:

The binding sites of Iron atom in the Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant (pdb code 5ezw). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant, PDB code: 5ezw:

Iron binding site 1 out of 1 in 5ezw

Go back to Iron Binding Sites List in 5ezw
Iron binding site 1 out of 1 in the Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:14.5
occ:1.00
NE2 A:HIS86 2.0 14.4 1.0
NE2 A:HIS88 2.1 13.8 1.0
NE2 A:HIS140 2.1 14.2 1.0
S2 A:THJ302 2.2 16.6 0.8
CE1 A:HIS88 2.9 17.6 1.0
CD2 A:HIS86 2.9 15.4 1.0
O2 A:THJ302 3.0 13.5 0.7
CE1 A:HIS86 3.0 17.2 1.0
CD2 A:HIS140 3.1 13.1 1.0
CE1 A:HIS140 3.1 14.4 1.0
S1 A:THJ302 3.1 16.2 0.7
CD2 A:HIS88 3.2 13.5 1.0
O3 A:THJ302 3.8 22.3 0.9
ND1 A:HIS88 4.1 16.2 1.0
CG A:HIS86 4.1 18.8 1.0
ND1 A:HIS86 4.1 17.8 1.0
ND1 A:HIS140 4.2 13.0 1.0
CG A:HIS140 4.2 15.1 1.0
CG A:HIS88 4.2 15.3 1.0
SG A:CYS93 4.4 22.9 1.0
O A:HOH469 4.4 21.3 1.0
O1 A:THJ302 4.5 14.9 0.7
O A:HOH500 4.6 32.4 1.0
CG2 A:VAL142 4.7 20.6 1.0
CG2 A:ILE133 4.7 16.1 1.0

Reference:

M.Fellner, S.M.Wilbanks. Thiosulfate Bound Rat Cysteine Dioxygenase Y157H Variant To Be Published.
Page generated: Sun Dec 13 16:01:10 2020

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