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Iron in PDB 5hdq: Mntc Co-Structure with Mab 305-78-7

Protein crystallography data

The structure of Mntc Co-Structure with Mab 305-78-7, PDB code: 5hdq was solved by K.Parris, L.Mosyak, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 36.60 / 1.83
Space group C 1 2 1
Cell size a, b, c (Å), α, β, γ (°) 179.712, 41.733, 108.404, 90.00, 97.09, 90.00
R / Rfree (%) 20.7 / 23.6

Iron Binding Sites:

The binding sites of Iron atom in the Mntc Co-Structure with Mab 305-78-7 (pdb code 5hdq). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Mntc Co-Structure with Mab 305-78-7, PDB code: 5hdq:

Iron binding site 1 out of 1 in 5hdq

Go back to Iron Binding Sites List in 5hdq
Iron binding site 1 out of 1 in the Mntc Co-Structure with Mab 305-78-7


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Mntc Co-Structure with Mab 305-78-7 within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe301

b:38.8
occ:1.00
NE2 A:HIS123 2.0 38.6 1.0
OD2 A:ASP264 2.1 47.0 1.0
NE2 A:HIS50 2.3 55.4 1.0
OE1 A:GLU189 2.3 49.2 1.0
OD1 A:ASP264 2.4 41.0 1.0
OE2 A:GLU189 2.6 44.5 1.0
CG A:ASP264 2.6 39.9 1.0
CD A:GLU189 2.8 52.4 1.0
CE1 A:HIS123 2.8 38.2 1.0
CD2 A:HIS50 3.1 55.5 1.0
CD2 A:HIS123 3.2 39.1 1.0
CE1 A:HIS50 3.4 54.9 1.0
ND2 A:ASN210 3.9 35.9 1.0
ND1 A:HIS123 4.0 38.7 1.0
CB A:ASP264 4.1 35.0 1.0
CG A:HIS123 4.2 37.3 1.0
O A:HOH410 4.2 42.4 1.0
CG A:GLU189 4.3 37.2 1.0
CG A:HIS50 4.3 53.9 1.0
O A:HOH406 4.4 31.4 1.0
CG A:ASN210 4.4 43.7 1.0
ND1 A:HIS50 4.5 55.5 1.0
CB A:ALA191 4.5 33.4 1.0
CD1 A:LEU75 4.8 47.0 1.0
CB A:ASN210 4.8 37.1 1.0
CA A:ASP264 5.0 33.8 1.0

Reference:

A.V.Gribenko, K.Parris, L.Mosyak, S.Li, L.Handke, J.C.Hawkins, E.Severina, Y.V.Matsuka, A.S.Anderson. High Resolution Mapping of Bactericidal Monoclonal Antibody Binding Epitopes on Staphylococcus Aureus Antigen Mntc. Plos Pathog. V. 12 05908 2016.
ISSN: ESSN 1553-7374
PubMed: 27689696
DOI: 10.1371/JOURNAL.PPAT.1005908
Page generated: Tue Aug 6 01:52:32 2024

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