Atomistry » Iron » PDB 5j84-5jrx » 5jk6
Atomistry »
  Iron »
    PDB 5j84-5jrx »
      5jk6 »

Iron in PDB 5jk6: Phenylalanine Hydroxylase From Dictyostelium - Apo Form

Enzymatic activity of Phenylalanine Hydroxylase From Dictyostelium - Apo Form

All present enzymatic activity of Phenylalanine Hydroxylase From Dictyostelium - Apo Form:
1.14.16.1; 1.14.16.4;

Protein crystallography data

The structure of Phenylalanine Hydroxylase From Dictyostelium - Apo Form, PDB code: 5jk6 was solved by N.Zhuang, K.H.Lee, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 37.50 / 2.07
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 70.871, 85.309, 74.913, 90.00, 110.04, 90.00
R / Rfree (%) 15.9 / 20.8

Iron Binding Sites:

The binding sites of Iron atom in the Phenylalanine Hydroxylase From Dictyostelium - Apo Form (pdb code 5jk6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Phenylalanine Hydroxylase From Dictyostelium - Apo Form, PDB code: 5jk6:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 5jk6

Go back to Iron Binding Sites List in 5jk6
Iron binding site 1 out of 2 in the Phenylalanine Hydroxylase From Dictyostelium - Apo Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Phenylalanine Hydroxylase From Dictyostelium - Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe502

b:30.5
occ:1.00
O A:HOH765 1.8 34.9 1.0
NE2 A:HIS278 2.0 28.5 1.0
NE2 A:HIS273 2.0 28.2 1.0
OE2 A:GLU318 2.2 41.4 1.0
O A:HOH712 2.4 47.0 1.0
OE1 A:GLU318 2.5 34.0 1.0
CD A:GLU318 2.7 36.9 1.0
CE1 A:HIS273 2.9 27.4 1.0
CD2 A:HIS278 3.0 28.3 1.0
CE1 A:HIS278 3.0 29.2 1.0
CD2 A:HIS273 3.1 21.9 1.0
O A:HOH694 3.2 58.0 1.0
O A:HOH665 3.2 44.2 1.0
O A:HOH841 3.9 53.4 1.0
O A:HOH825 4.1 46.9 1.0
ND1 A:HIS273 4.1 32.5 1.0
ND1 A:HIS278 4.1 33.8 1.0
CG A:HIS278 4.2 31.9 1.0
CG A:HIS273 4.2 31.6 1.0
CG A:GLU318 4.2 38.1 1.0
CB A:ALA333 4.5 25.1 1.0
OE1 A:GLU274 4.8 35.2 1.0

Iron binding site 2 out of 2 in 5jk6

Go back to Iron Binding Sites List in 5jk6
Iron binding site 2 out of 2 in the Phenylalanine Hydroxylase From Dictyostelium - Apo Form


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Phenylalanine Hydroxylase From Dictyostelium - Apo Form within 5.0Å range:
probe atom residue distance (Å) B Occ
B:Fe502

b:28.2
occ:1.00
NE2 B:HIS273 2.0 26.4 1.0
NE2 B:HIS278 2.1 21.1 1.0
O B:HOH691 2.1 32.1 1.0
O B:HOH706 2.1 33.6 1.0
OE2 B:GLU318 2.3 34.5 1.0
OE1 B:GLU318 2.3 29.6 1.0
CD B:GLU318 2.7 30.7 1.0
CE1 B:HIS273 3.0 25.5 1.0
CE1 B:HIS278 3.0 24.4 1.0
CD2 B:HIS273 3.1 22.9 1.0
CD2 B:HIS278 3.1 23.1 1.0
O B:HOH622 3.1 44.6 1.0
ND1 B:HIS273 4.1 28.9 1.0
ND1 B:HIS278 4.1 22.3 1.0
CG B:HIS273 4.2 31.1 1.0
CG B:GLU318 4.2 33.9 1.0
CG B:HIS278 4.2 20.9 1.0
O B:HOH775 4.4 54.0 1.0
CB B:ALA333 4.5 28.6 1.0
OE1 B:GLU274 4.5 35.7 1.0
O B:HOH742 4.6 50.0 1.0
O B:HOH786 4.9 56.8 1.0

Reference:

N.Zhuang, K.H.Lee. Phenylalanine Hydroxylase From Dictyostelium - Apo Form To Be Published.
Page generated: Sun Dec 13 16:04:18 2020

Last articles

Zn in 8WB0
Zn in 8WAX
Zn in 8WAU
Zn in 8WAZ
Zn in 8WAY
Zn in 8WAV
Zn in 8WAW
Zn in 8WAT
Zn in 8W7M
Zn in 8WD3
© Copyright 2008-2020 by atomistry.com
Home   |    Site Map   |    Copyright   |    Contact us   |    Privacy