Iron in PDB 5ker: Deer Mouse Recombinant Hemoglobin From High Altitude Species
Protein crystallography data
The structure of Deer Mouse Recombinant Hemoglobin From High Altitude Species, PDB code: 5ker
was solved by
N.Inoguchi,
C.Natarajan,
J.F.Storz,
H.Moriyama,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
|
Resolution Low / High (Å)
|
29.56 /
2.20
|
|
Space group
|
P 1 21 1
|
|
Cell size a, b, c (Å), α, β, γ (°)
|
53.182,
229.618,
53.277,
90.00,
119.12,
90.00
|
|
R / Rfree (%)
|
19.3 /
20.2
|
Iron Binding Sites:
The binding sites of Iron atom in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
(pdb code 5ker). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the
Deer Mouse Recombinant Hemoglobin From High Altitude Species, PDB code: 5ker:
Jump to Iron binding site number:
1;
2;
3;
4;
5;
6;
7;
8;
Iron binding site 1 out
of 8 in 5ker
Go back to
Iron Binding Sites List in 5ker
Iron binding site 1 out
of 8 in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Deer Mouse Recombinant Hemoglobin From High Altitude Species within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
C:Fe201
b:24.3
occ:1.00
|
FE
|
C:HEM201
|
0.0
|
24.3
|
1.0
|
|
NB
|
C:HEM201
|
2.0
|
24.1
|
1.0
|
|
NA
|
C:HEM201
|
2.0
|
28.8
|
1.0
|
|
NC
|
C:HEM201
|
2.1
|
27.8
|
1.0
|
|
ND
|
C:HEM201
|
2.1
|
28.8
|
1.0
|
|
NE2
|
C:HIS87
|
2.5
|
23.1
|
1.0
|
|
O
|
C:HOH315
|
2.6
|
22.8
|
1.0
|
|
C4A
|
C:HEM201
|
3.0
|
27.7
|
1.0
|
|
C1B
|
C:HEM201
|
3.0
|
25.1
|
1.0
|
|
C4C
|
C:HEM201
|
3.1
|
24.1
|
1.0
|
|
C4B
|
C:HEM201
|
3.1
|
23.1
|
1.0
|
|
C1A
|
C:HEM201
|
3.1
|
27.2
|
1.0
|
|
C1D
|
C:HEM201
|
3.1
|
25.0
|
1.0
|
|
C1C
|
C:HEM201
|
3.1
|
23.4
|
1.0
|
|
C4D
|
C:HEM201
|
3.1
|
28.1
|
1.0
|
|
CD2
|
C:HIS87
|
3.2
|
24.1
|
1.0
|
|
CHB
|
C:HEM201
|
3.4
|
26.1
|
1.0
|
|
CHD
|
C:HEM201
|
3.4
|
25.2
|
1.0
|
|
CHC
|
C:HEM201
|
3.4
|
24.3
|
1.0
|
|
CHA
|
C:HEM201
|
3.5
|
27.3
|
1.0
|
|
CE1
|
C:HIS87
|
3.7
|
27.8
|
1.0
|
|
NE2
|
C:HIS58
|
4.2
|
30.1
|
1.0
|
|
C3A
|
C:HEM201
|
4.2
|
27.4
|
1.0
|
|
C2B
|
C:HEM201
|
4.3
|
23.8
|
1.0
|
|
C2A
|
C:HEM201
|
4.3
|
29.4
|
1.0
|
|
C3B
|
C:HEM201
|
4.3
|
29.0
|
1.0
|
|
C3C
|
C:HEM201
|
4.3
|
23.1
|
1.0
|
|
C2C
|
C:HEM201
|
4.3
|
23.4
|
1.0
|
|
C2D
|
C:HEM201
|
4.3
|
25.1
|
1.0
|
|
C3D
|
C:HEM201
|
4.3
|
25.8
|
1.0
|
|
CG
|
C:HIS87
|
4.5
|
26.1
|
1.0
|
|
ND1
|
C:HIS87
|
4.6
|
25.8
|
1.0
|
|
CE1
|
C:HIS58
|
4.7
|
30.5
|
1.0
|
|
CG2
|
C:VAL62
|
4.9
|
22.8
|
1.0
|
|
Iron binding site 2 out
of 8 in 5ker
Go back to
Iron Binding Sites List in 5ker
Iron binding site 2 out
of 8 in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Deer Mouse Recombinant Hemoglobin From High Altitude Species within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
D:Fe201
b:25.8
occ:1.00
|
FE
|
D:HEM201
|
0.0
|
25.8
|
1.0
|
|
NB
|
D:HEM201
|
2.0
|
27.5
|
1.0
|
|
NC
|
D:HEM201
|
2.1
|
28.7
|
1.0
|
|
NA
|
D:HEM201
|
2.1
|
37.7
|
1.0
|
|
ND
|
D:HEM201
|
2.1
|
35.2
|
1.0
|
|
NE2
|
D:HIS92
|
2.5
|
22.8
|
1.0
|
|
O
|
D:HOH324
|
2.7
|
25.9
|
1.0
|
|
C1B
|
D:HEM201
|
3.0
|
25.9
|
1.0
|
|
C4B
|
D:HEM201
|
3.0
|
25.9
|
1.0
|
|
C4A
|
D:HEM201
|
3.0
|
30.9
|
1.0
|
|
C1C
|
D:HEM201
|
3.1
|
19.4
|
1.0
|
|
C4C
|
D:HEM201
|
3.1
|
29.5
|
1.0
|
|
C1D
|
D:HEM201
|
3.1
|
25.5
|
1.0
|
|
C4D
|
D:HEM201
|
3.1
|
28.2
|
1.0
|
|
C1A
|
D:HEM201
|
3.1
|
32.6
|
1.0
|
|
CHB
|
D:HEM201
|
3.4
|
28.6
|
1.0
|
|
CHC
|
D:HEM201
|
3.4
|
19.1
|
1.0
|
|
CE1
|
D:HIS92
|
3.4
|
30.2
|
1.0
|
|
CD2
|
D:HIS92
|
3.4
|
28.7
|
1.0
|
|
CHA
|
D:HEM201
|
3.5
|
30.8
|
1.0
|
|
CHD
|
D:HEM201
|
3.5
|
21.5
|
1.0
|
|
NE2
|
D:HIS63
|
4.1
|
29.6
|
1.0
|
|
C2B
|
D:HEM201
|
4.2
|
21.8
|
1.0
|
|
C3B
|
D:HEM201
|
4.2
|
21.6
|
1.0
|
|
C3A
|
D:HEM201
|
4.3
|
24.6
|
1.0
|
|
C2C
|
D:HEM201
|
4.3
|
24.2
|
1.0
|
|
C3C
|
D:HEM201
|
4.3
|
25.9
|
1.0
|
|
C2A
|
D:HEM201
|
4.3
|
28.1
|
1.0
|
|
C2D
|
D:HEM201
|
4.3
|
29.8
|
1.0
|
|
C3D
|
D:HEM201
|
4.3
|
31.9
|
1.0
|
|
CG2
|
D:VAL67
|
4.4
|
18.9
|
1.0
|
|
ND1
|
D:HIS92
|
4.6
|
32.9
|
1.0
|
|
CG
|
D:HIS92
|
4.6
|
30.1
|
1.0
|
|
CE1
|
D:HIS63
|
4.8
|
27.7
|
1.0
|
|
Iron binding site 3 out
of 8 in 5ker
Go back to
Iron Binding Sites List in 5ker
Iron binding site 3 out
of 8 in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Deer Mouse Recombinant Hemoglobin From High Altitude Species within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
E:Fe201
b:23.8
occ:1.00
|
FE
|
E:HEM201
|
0.0
|
23.8
|
1.0
|
|
NB
|
E:HEM201
|
2.0
|
20.9
|
1.0
|
|
NC
|
E:HEM201
|
2.0
|
20.9
|
1.0
|
|
NA
|
E:HEM201
|
2.1
|
25.3
|
1.0
|
|
ND
|
E:HEM201
|
2.1
|
23.1
|
1.0
|
|
NE2
|
E:HIS87
|
2.4
|
24.1
|
1.0
|
|
O
|
E:HOH324
|
2.6
|
22.5
|
1.0
|
|
C4B
|
E:HEM201
|
3.0
|
22.6
|
1.0
|
|
C1C
|
E:HEM201
|
3.0
|
19.4
|
1.0
|
|
C1B
|
E:HEM201
|
3.0
|
24.4
|
1.0
|
|
CD2
|
E:HIS87
|
3.1
|
21.1
|
1.0
|
|
C4C
|
E:HEM201
|
3.1
|
19.1
|
1.0
|
|
C1A
|
E:HEM201
|
3.1
|
26.8
|
1.0
|
|
C4A
|
E:HEM201
|
3.1
|
21.9
|
1.0
|
|
C4D
|
E:HEM201
|
3.1
|
19.4
|
1.0
|
|
C1D
|
E:HEM201
|
3.1
|
21.6
|
1.0
|
|
CHC
|
E:HEM201
|
3.3
|
17.2
|
1.0
|
|
CHB
|
E:HEM201
|
3.4
|
24.6
|
1.0
|
|
CHA
|
E:HEM201
|
3.5
|
21.3
|
1.0
|
|
CHD
|
E:HEM201
|
3.5
|
22.6
|
1.0
|
|
CE1
|
E:HIS87
|
3.6
|
25.4
|
1.0
|
|
C3B
|
E:HEM201
|
4.2
|
22.9
|
1.0
|
|
C2B
|
E:HEM201
|
4.2
|
20.4
|
1.0
|
|
NE2
|
E:HIS58
|
4.2
|
24.0
|
1.0
|
|
C2C
|
E:HEM201
|
4.2
|
19.9
|
1.0
|
|
C3C
|
E:HEM201
|
4.3
|
22.7
|
1.0
|
|
C2A
|
E:HEM201
|
4.3
|
27.3
|
1.0
|
|
C3A
|
E:HEM201
|
4.3
|
21.7
|
1.0
|
|
C3D
|
E:HEM201
|
4.3
|
25.1
|
1.0
|
|
CG
|
E:HIS87
|
4.3
|
23.1
|
1.0
|
|
C2D
|
E:HEM201
|
4.3
|
21.9
|
1.0
|
|
CG2
|
E:VAL62
|
4.5
|
21.6
|
1.0
|
|
ND1
|
E:HIS87
|
4.6
|
26.3
|
1.0
|
|
Iron binding site 4 out
of 8 in 5ker
Go back to
Iron Binding Sites List in 5ker
Iron binding site 4 out
of 8 in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Deer Mouse Recombinant Hemoglobin From High Altitude Species within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
F:Fe201
b:25.5
occ:1.00
|
FE
|
F:HEM201
|
0.0
|
25.5
|
1.0
|
|
NA
|
F:HEM201
|
2.0
|
24.6
|
1.0
|
|
NB
|
F:HEM201
|
2.0
|
20.0
|
1.0
|
|
NC
|
F:HEM201
|
2.0
|
22.5
|
1.0
|
|
ND
|
F:HEM201
|
2.1
|
26.8
|
1.0
|
|
NE2
|
F:HIS92
|
2.5
|
18.3
|
1.0
|
|
O
|
F:HOH337
|
2.6
|
23.2
|
1.0
|
|
C4A
|
F:HEM201
|
3.0
|
22.5
|
1.0
|
|
C1B
|
F:HEM201
|
3.0
|
24.8
|
1.0
|
|
C1A
|
F:HEM201
|
3.0
|
22.8
|
1.0
|
|
C1C
|
F:HEM201
|
3.1
|
21.2
|
1.0
|
|
C4B
|
F:HEM201
|
3.1
|
20.8
|
1.0
|
|
C4C
|
F:HEM201
|
3.1
|
23.0
|
1.0
|
|
C1D
|
F:HEM201
|
3.1
|
24.7
|
1.0
|
|
C4D
|
F:HEM201
|
3.1
|
27.9
|
1.0
|
|
CE1
|
F:HIS92
|
3.4
|
22.1
|
1.0
|
|
CHB
|
F:HEM201
|
3.4
|
21.6
|
1.0
|
|
CHC
|
F:HEM201
|
3.4
|
21.3
|
1.0
|
|
CHA
|
F:HEM201
|
3.5
|
22.4
|
1.0
|
|
CD2
|
F:HIS92
|
3.5
|
20.8
|
1.0
|
|
CHD
|
F:HEM201
|
3.5
|
25.9
|
1.0
|
|
C3A
|
F:HEM201
|
4.2
|
21.2
|
1.0
|
|
C2A
|
F:HEM201
|
4.3
|
24.0
|
1.0
|
|
CE1
|
F:HIS63
|
4.3
|
26.2
|
1.0
|
|
C2B
|
F:HEM201
|
4.3
|
26.3
|
1.0
|
|
C2C
|
F:HEM201
|
4.3
|
20.9
|
1.0
|
|
C3B
|
F:HEM201
|
4.3
|
22.6
|
1.0
|
|
C3C
|
F:HEM201
|
4.3
|
23.1
|
1.0
|
|
C2D
|
F:HEM201
|
4.3
|
28.6
|
1.0
|
|
C3D
|
F:HEM201
|
4.3
|
30.4
|
1.0
|
|
ND1
|
F:HIS92
|
4.5
|
25.0
|
1.0
|
|
CG2
|
F:VAL67
|
4.5
|
17.6
|
1.0
|
|
CG
|
F:HIS92
|
4.6
|
20.9
|
1.0
|
|
Iron binding site 5 out
of 8 in 5ker
Go back to
Iron Binding Sites List in 5ker
Iron binding site 5 out
of 8 in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Deer Mouse Recombinant Hemoglobin From High Altitude Species within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
G:Fe201
b:21.6
occ:1.00
|
FE
|
G:HEM201
|
0.0
|
21.6
|
1.0
|
|
NA
|
G:HEM201
|
2.0
|
21.2
|
1.0
|
|
ND
|
G:HEM201
|
2.0
|
25.4
|
1.0
|
|
NC
|
G:HEM201
|
2.0
|
23.2
|
1.0
|
|
NB
|
G:HEM201
|
2.0
|
25.0
|
1.0
|
|
NE2
|
G:HIS87
|
2.4
|
25.8
|
1.0
|
|
O
|
G:HOH353
|
2.6
|
22.1
|
1.0
|
|
C1A
|
G:HEM201
|
3.0
|
27.1
|
1.0
|
|
C1C
|
G:HEM201
|
3.0
|
21.2
|
1.0
|
|
C4B
|
G:HEM201
|
3.0
|
22.0
|
1.0
|
|
C4A
|
G:HEM201
|
3.1
|
24.2
|
1.0
|
|
C4D
|
G:HEM201
|
3.1
|
22.3
|
1.0
|
|
C4C
|
G:HEM201
|
3.1
|
22.9
|
1.0
|
|
C1D
|
G:HEM201
|
3.1
|
27.3
|
1.0
|
|
C1B
|
G:HEM201
|
3.1
|
20.9
|
1.0
|
|
CD2
|
G:HIS87
|
3.3
|
23.2
|
1.0
|
|
CHC
|
G:HEM201
|
3.4
|
19.2
|
1.0
|
|
CHA
|
G:HEM201
|
3.4
|
23.3
|
1.0
|
|
CE1
|
G:HIS87
|
3.4
|
26.9
|
1.0
|
|
CHB
|
G:HEM201
|
3.4
|
26.0
|
1.0
|
|
CHD
|
G:HEM201
|
3.5
|
20.2
|
1.0
|
|
C2A
|
G:HEM201
|
4.3
|
26.8
|
1.0
|
|
C3A
|
G:HEM201
|
4.3
|
23.4
|
1.0
|
|
CE1
|
G:HIS58
|
4.3
|
26.2
|
1.0
|
|
C2C
|
G:HEM201
|
4.3
|
23.9
|
1.0
|
|
C3B
|
G:HEM201
|
4.3
|
20.6
|
1.0
|
|
C3D
|
G:HEM201
|
4.3
|
23.3
|
1.0
|
|
C3C
|
G:HEM201
|
4.3
|
21.6
|
1.0
|
|
C2D
|
G:HEM201
|
4.3
|
24.8
|
1.0
|
|
C2B
|
G:HEM201
|
4.3
|
25.1
|
1.0
|
|
CG
|
G:HIS87
|
4.5
|
20.5
|
1.0
|
|
ND1
|
G:HIS87
|
4.5
|
22.7
|
1.0
|
|
CG2
|
G:VAL62
|
4.8
|
20.7
|
1.0
|
|
Iron binding site 6 out
of 8 in 5ker
Go back to
Iron Binding Sites List in 5ker
Iron binding site 6 out
of 8 in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Deer Mouse Recombinant Hemoglobin From High Altitude Species within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
H:Fe201
b:26.1
occ:1.00
|
FE
|
H:HEM201
|
0.0
|
26.1
|
1.0
|
|
ND
|
H:HEM201
|
2.0
|
27.4
|
1.0
|
|
NA
|
H:HEM201
|
2.0
|
22.1
|
1.0
|
|
NC
|
H:HEM201
|
2.1
|
20.7
|
1.0
|
|
NB
|
H:HEM201
|
2.1
|
24.0
|
1.0
|
|
NE2
|
H:HIS92
|
2.6
|
27.9
|
1.0
|
|
C4D
|
H:HEM201
|
3.0
|
26.8
|
1.0
|
|
C1A
|
H:HEM201
|
3.0
|
24.9
|
1.0
|
|
C1D
|
H:HEM201
|
3.1
|
22.0
|
1.0
|
|
C1C
|
H:HEM201
|
3.1
|
29.0
|
1.0
|
|
C4B
|
H:HEM201
|
3.1
|
26.8
|
1.0
|
|
C4A
|
H:HEM201
|
3.1
|
30.0
|
1.0
|
|
C4C
|
H:HEM201
|
3.1
|
22.9
|
1.0
|
|
C1B
|
H:HEM201
|
3.1
|
27.2
|
1.0
|
|
CHA
|
H:HEM201
|
3.4
|
24.7
|
1.0
|
|
CHC
|
H:HEM201
|
3.4
|
25.6
|
1.0
|
|
CHD
|
H:HEM201
|
3.4
|
26.5
|
1.0
|
|
CE1
|
H:HIS92
|
3.5
|
28.5
|
1.0
|
|
CHB
|
H:HEM201
|
3.5
|
30.0
|
1.0
|
|
CD2
|
H:HIS92
|
3.6
|
30.7
|
1.0
|
|
CG2
|
H:VAL67
|
4.1
|
24.3
|
1.0
|
|
NE2
|
H:HIS63
|
4.2
|
27.4
|
1.0
|
|
C3D
|
H:HEM201
|
4.2
|
23.9
|
1.0
|
|
C2D
|
H:HEM201
|
4.3
|
29.3
|
1.0
|
|
C2A
|
H:HEM201
|
4.3
|
31.2
|
1.0
|
|
C3A
|
H:HEM201
|
4.3
|
29.2
|
1.0
|
|
C2C
|
H:HEM201
|
4.3
|
29.9
|
1.0
|
|
C3C
|
H:HEM201
|
4.3
|
25.1
|
1.0
|
|
C3B
|
H:HEM201
|
4.3
|
31.7
|
1.0
|
|
C2B
|
H:HEM201
|
4.3
|
27.9
|
1.0
|
|
ND1
|
H:HIS92
|
4.6
|
33.5
|
1.0
|
|
CG
|
H:HIS92
|
4.7
|
34.7
|
1.0
|
|
CD2
|
H:HIS63
|
4.9
|
20.6
|
1.0
|
|
Iron binding site 7 out
of 8 in 5ker
Go back to
Iron Binding Sites List in 5ker
Iron binding site 7 out
of 8 in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 7 of Deer Mouse Recombinant Hemoglobin From High Altitude Species within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
A:Fe201
b:21.5
occ:1.00
|
FE
|
A:HEM201
|
0.0
|
21.5
|
1.0
|
|
NC
|
A:HEM201
|
2.0
|
23.2
|
1.0
|
|
ND
|
A:HEM201
|
2.0
|
28.8
|
1.0
|
|
NB
|
A:HEM201
|
2.1
|
19.4
|
1.0
|
|
NA
|
A:HEM201
|
2.1
|
22.4
|
1.0
|
|
NE2
|
A:HIS87
|
2.5
|
18.9
|
1.0
|
|
O
|
A:HOH331
|
2.6
|
22.6
|
1.0
|
|
C4C
|
A:HEM201
|
3.0
|
21.7
|
1.0
|
|
C1D
|
A:HEM201
|
3.0
|
26.4
|
1.0
|
|
C1C
|
A:HEM201
|
3.0
|
20.0
|
1.0
|
|
C4A
|
A:HEM201
|
3.1
|
22.4
|
1.0
|
|
C1B
|
A:HEM201
|
3.1
|
18.0
|
1.0
|
|
C4B
|
A:HEM201
|
3.1
|
22.7
|
1.0
|
|
CD2
|
A:HIS87
|
3.1
|
14.7
|
1.0
|
|
C4D
|
A:HEM201
|
3.1
|
26.4
|
1.0
|
|
C1A
|
A:HEM201
|
3.1
|
21.8
|
1.0
|
|
CHD
|
A:HEM201
|
3.4
|
26.9
|
1.0
|
|
CHB
|
A:HEM201
|
3.4
|
19.1
|
1.0
|
|
CHC
|
A:HEM201
|
3.4
|
17.5
|
1.0
|
|
CHA
|
A:HEM201
|
3.5
|
25.9
|
1.0
|
|
CE1
|
A:HIS87
|
3.6
|
22.8
|
1.0
|
|
NE2
|
A:HIS58
|
4.2
|
24.0
|
1.0
|
|
C3C
|
A:HEM201
|
4.2
|
23.3
|
1.0
|
|
C2C
|
A:HEM201
|
4.2
|
23.8
|
1.0
|
|
C2D
|
A:HEM201
|
4.3
|
25.6
|
1.0
|
|
C3A
|
A:HEM201
|
4.3
|
18.3
|
1.0
|
|
C3D
|
A:HEM201
|
4.3
|
26.5
|
1.0
|
|
C2B
|
A:HEM201
|
4.3
|
23.8
|
1.0
|
|
C2A
|
A:HEM201
|
4.3
|
22.7
|
1.0
|
|
C3B
|
A:HEM201
|
4.3
|
23.9
|
1.0
|
|
CG
|
A:HIS87
|
4.3
|
18.8
|
1.0
|
|
ND1
|
A:HIS87
|
4.6
|
22.5
|
1.0
|
|
CG2
|
A:VAL62
|
4.9
|
14.5
|
1.0
|
|
CE1
|
A:HIS58
|
4.9
|
30.8
|
1.0
|
|
Iron binding site 8 out
of 8 in 5ker
Go back to
Iron Binding Sites List in 5ker
Iron binding site 8 out
of 8 in the Deer Mouse Recombinant Hemoglobin From High Altitude Species
 Mono view
 Stereo pair view
|
|
A full contact list of Iron with other atoms in the Fe binding
site number 8 of Deer Mouse Recombinant Hemoglobin From High Altitude Species within 5.0Å range:
|
probe
|
atom
|
residue
|
distance (Å)
|
B
|
Occ
|
B:Fe201
b:28.5
occ:1.00
|
FE
|
B:HEM201
|
0.0
|
28.5
|
1.0
|
|
NC
|
B:HEM201
|
2.0
|
25.7
|
1.0
|
|
ND
|
B:HEM201
|
2.0
|
32.7
|
1.0
|
|
NB
|
B:HEM201
|
2.1
|
29.2
|
1.0
|
|
NA
|
B:HEM201
|
2.1
|
36.1
|
1.0
|
|
NE2
|
B:HIS92
|
2.6
|
27.4
|
1.0
|
|
O
|
B:HOH336
|
2.6
|
25.7
|
1.0
|
|
C1C
|
B:HEM201
|
3.0
|
33.2
|
1.0
|
|
C4B
|
B:HEM201
|
3.0
|
32.4
|
1.0
|
|
C4C
|
B:HEM201
|
3.0
|
26.8
|
1.0
|
|
C4D
|
B:HEM201
|
3.1
|
34.4
|
1.0
|
|
C1D
|
B:HEM201
|
3.1
|
30.9
|
1.0
|
|
C1A
|
B:HEM201
|
3.1
|
35.2
|
1.0
|
|
C1B
|
B:HEM201
|
3.1
|
32.9
|
1.0
|
|
C4A
|
B:HEM201
|
3.1
|
30.4
|
1.0
|
|
CHC
|
B:HEM201
|
3.4
|
29.5
|
1.0
|
|
CHA
|
B:HEM201
|
3.4
|
39.1
|
1.0
|
|
CHD
|
B:HEM201
|
3.4
|
29.7
|
1.0
|
|
CD2
|
B:HIS92
|
3.4
|
37.7
|
1.0
|
|
CHB
|
B:HEM201
|
3.5
|
35.1
|
1.0
|
|
CE1
|
B:HIS92
|
3.6
|
32.2
|
1.0
|
|
NE2
|
B:HIS63
|
4.0
|
36.8
|
1.0
|
|
C2C
|
B:HEM201
|
4.2
|
33.6
|
1.0
|
|
C3C
|
B:HEM201
|
4.3
|
28.0
|
1.0
|
|
C2A
|
B:HEM201
|
4.3
|
38.7
|
1.0
|
|
C2D
|
B:HEM201
|
4.3
|
29.9
|
1.0
|
|
C3D
|
B:HEM201
|
4.3
|
31.7
|
1.0
|
|
C3B
|
B:HEM201
|
4.3
|
30.2
|
1.0
|
|
C3A
|
B:HEM201
|
4.3
|
34.7
|
1.0
|
|
C2B
|
B:HEM201
|
4.3
|
32.3
|
1.0
|
|
CG2
|
B:VAL67
|
4.4
|
29.1
|
1.0
|
|
CG
|
B:HIS92
|
4.6
|
39.2
|
1.0
|
|
ND1
|
B:HIS92
|
4.7
|
33.2
|
1.0
|
|
CE1
|
B:HIS63
|
4.9
|
34.4
|
1.0
|
|
CD2
|
B:HIS63
|
5.0
|
32.5
|
1.0
|
|
Reference:
N.Inoguchi,
N.Mizuno,
S.Baba,
T.Kumasaka,
C.Natarajan,
J.F.Storz,
H.Moriyama.
Alteration of the Alpha 1 Beta 2/ Alpha 2 Beta 1 Subunit Interface Contributes to the Increased Hemoglobin-Oxygen Affinity of High-Altitude Deer Mice. Plos One V. 12 74921 2017.
ISSN: ESSN 1932-6203
PubMed: 28362841
DOI: 10.1371/JOURNAL.PONE.0174921
Page generated: Tue Aug 6 03:16:32 2024
|
