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Iron in PDB 5lry: E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Enzymatic activity of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
All present enzymatic activity of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D:
1.12.99.6;
1.12.99.6;
Protein crystallography data
The structure of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D, PDB code: 5lry
was solved by
S.B.Carr,
S.E.V.Phillips,
R.M.Evans,
E.J.Brooke,
F.A.Armstrong,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 92.79 / 1.40 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 94.756, 98.746, 185.243, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 14.6 / 16.3 |
Other elements in 5lry:
The structure of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D also contains other interesting chemical elements:
| Nickel | (Ni) | 2 atoms |
| Magnesium | (Mg) | 2 atoms |
| Chlorine | (Cl) | 2 atoms |
Iron Binding Sites:
Pages:
>>> Page 1 <<< Page 2, Binding sites: 11 - 20; Page 3, Binding sites: 21 - 24;Binding sites:
The binding sites of Iron atom in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D (pdb code 5lry). This binding sites where shown within 5.0 Angstroms radius around Iron atom.In total 24 binding sites of Iron where determined in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D, PDB code: 5lry:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8; 9; 10;
Iron binding site 1 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 1 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 2 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 2 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 3 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 3 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 4 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 4 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 5 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 5 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 6 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 6 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 7 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 7 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 7 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 8 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 8 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 8 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 9 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 9 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 9 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Iron binding site 10 out of 24 in 5lry
Go back to
Iron Binding Sites List in 5lry
Iron binding site 10 out
of 24 in the E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 10 of E Coli [Nife] Hydrogenase Hyd-1 Mutant E28D within 5.0Å range:
|
Reference:
R.M.Evans,
P.A.Ash,
S.E.Beaton,
E.J.Brooke,
K.A.Vincent,
S.B.Carr,
F.A.Armstrong.
Mechanistic Exploitation of A Self-Repairing, Blocked Proton Transfer Pathway in An O2-Tolerant [Nife]-Hydrogenase. J.Am.Chem.Soc. V. 140 10208 2018.
ISSN: ESSN 1520-5126
PubMed: 30070475
DOI: 10.1021/JACS.8B04798
Page generated: Sun Dec 13 16:07:32 2020
ISSN: ESSN 1520-5126
PubMed: 30070475
DOI: 10.1021/JACS.8B04798
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