Iron in PDB 5lw7: S. Solfataricus ABCE1 Post-Splitting State

The binding sites of Iron atom in the S. Solfataricus ABCE1 Post-Splitting State (pdb code 5lw7). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the S. Solfataricus ABCE1 Post-Splitting State, PDB code: 5lw7:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Iron binding site 1 out of 8 in the S. Solfataricus ABCE1 Post-Splitting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of S. Solfataricus ABCE1 Post-Splitting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe601 b:29.9 occ:1.00 FE1 B:SF4601 0.0 29.9 1.0 S3 B:SF4601 2.2 27.7 1.0 S2 B:SF4601 2.2 25.1 1.0 S4 B:SF4601 2.2 27.7 1.0 FE4 B:SF4601 3.0 30.0 1.0 FE2 B:SF4601 3.1 30.5 1.0 FE3 B:SF4601 3.1 29.9 1.0 SG B:CYS58 3.5 0.0 1.0 SG B:CYS55 3.6 0.0 1.0 S1 B:SF4601 3.8 29.6 1.0 N B:CYS58 3.8 0.0 1.0 N B:GLY57 3.8 0.0 1.0 N B:GLY59 4.0 0.0 1.0 N B:THR56 4.1 0.0 1.0 OG1 B:THR56 4.3 0.0 1.0 CA B:GLY57 4.3 0.0 1.0 CA B:CYS55 4.4 0.0 1.0 CB B:CYS55 4.4 0.0 1.0 CB B:CYS58 4.4 0.0 1.0 C B:GLY57 4.4 0.0 1.0 CA B:CYS58 4.5 0.0 1.0 C B:CYS55 4.6 0.0 1.0 SG B:CYS61 4.6 0.0 1.0 C B:CYS58 4.8 0.0 1.0 C B:THR56 4.8 0.0 1.0 CA B:GLY59 4.9 0.0 1.0 N B:ILE60 4.9 0.0 1.0 CA B:THR56 4.9 0.0 1.0

Iron binding site 2 out of 8 in the S. Solfataricus ABCE1 Post-Splitting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of S. Solfataricus ABCE1 Post-Splitting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe601 b:30.5 occ:1.00 FE2 B:SF4601 0.0 30.5 1.0 SG B:CYS55 1.1 0.0 1.0 N B:GLY57 2.2 0.0 1.0 S3 B:SF4601 2.2 27.7 1.0 S4 B:SF4601 2.2 27.7 1.0 S1 B:SF4601 2.2 29.6 1.0 CB B:CYS55 2.3 0.0 1.0 C B:CYS55 2.5 0.0 1.0 CA B:CYS55 2.7 0.0 1.0 N B:THR56 2.8 0.0 1.0 CA B:GLY57 2.8 0.0 1.0 O B:CYS55 3.0 0.0 1.0 FE4 B:SF4601 3.1 30.0 1.0 FE3 B:SF4601 3.1 29.9 1.0 FE1 B:SF4601 3.1 29.9 1.0 C B:THR56 3.2 0.0 1.0 CA B:THR56 3.6 0.0 1.0 S2 B:SF4601 3.8 25.1 1.0 C B:GLY57 4.0 0.0 1.0 CD B:ARG6 4.0 0.0 1.0 N B:CYS58 4.1 0.0 1.0 N B:CYS55 4.1 0.0 1.0 CG2 B:ILE72 4.2 0.0 1.0 O B:THR56 4.3 0.0 1.0 CG B:ARG6 4.3 0.0 1.0 CD1 B:ILE72 4.5 0.0 1.0 OG1 B:THR56 4.6 0.0 1.0 CB B:THR56 4.7 0.0 1.0 O B:SER54 4.8 0.0 1.0 C B:SER54 4.9 0.0 1.0 CB B:ARG6 5.0 0.0 1.0

Iron binding site 3 out of 8 in the S. Solfataricus ABCE1 Post-Splitting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of S. Solfataricus ABCE1 Post-Splitting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe601 b:29.9 occ:1.00 FE3 B:SF4601 0.0 29.9 1.0 S2 B:SF4601 2.2 25.1 1.0 S1 B:SF4601 2.2 29.6 1.0 S4 B:SF4601 2.2 27.7 1.0 SG B:CYS55 2.5 0.0 1.0 CD1 B:ILE72 2.9 0.0 1.0 FE2 B:SF4601 3.1 30.5 1.0 FE4 B:SF4601 3.1 30.0 1.0 FE1 B:SF4601 3.1 29.9 1.0 CB B:CYS55 3.2 0.0 1.0 CG2 B:ILE50 3.5 0.0 1.0 CG1 B:ILE72 3.7 0.0 1.0 S3 B:SF4601 3.8 27.7 1.0 SG B:CYS61 3.9 0.0 1.0 CD1 B:ILE50 4.0 0.0 1.0 CA B:CYS55 4.1 0.0 1.0 CG1 B:ILE50 4.5 0.0 1.0 CG2 B:ILE72 4.6 0.0 1.0 CB B:ILE50 4.6 0.0 1.0 CB B:ILE72 4.7 0.0 1.0 C B:CYS55 4.9 0.0 1.0 CG1 B:ILE39 5.0 0.0 1.0

Iron binding site 4 out of 8 in the S. Solfataricus ABCE1 Post-Splitting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of S. Solfataricus ABCE1 Post-Splitting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe601 b:30.0 occ:1.00 FE4 B:SF4601 0.0 30.0 1.0 S3 B:SF4601 2.2 27.7 1.0 S2 B:SF4601 2.2 25.1 1.0 S1 B:SF4601 2.2 29.6 1.0 CG2 B:ILE72 2.7 0.0 1.0 CG1 B:ILE72 3.0 0.0 1.0 FE1 B:SF4601 3.0 29.9 1.0 FE2 B:SF4601 3.1 30.5 1.0 FE3 B:SF4601 3.1 29.9 1.0 CA B:GLY57 3.1 0.0 1.0 CB B:ILE72 3.2 0.0 1.0 SG B:CYS55 3.2 0.0 1.0 N B:GLY59 3.2 0.0 1.0 C B:GLY57 3.4 0.0 1.0 CD1 B:ILE72 3.4 0.0 1.0 CA B:GLY59 3.6 0.0 1.0 N B:GLY57 3.7 0.0 1.0 N B:CYS58 3.7 0.0 1.0 S4 B:SF4601 3.7 27.7 1.0 O B:GLY57 3.9 0.0 1.0 C B:CYS58 4.4 0.0 1.0 SG B:CYS61 4.5 0.0 1.0 CG2 B:VAL62 4.5 0.0 1.0 CA B:CYS58 4.6 0.0 1.0 CA B:ILE72 4.7 0.0 1.0 C B:GLY59 4.8 0.0 1.0 CB B:CYS55 4.9 0.0 1.0

Iron binding site 5 out of 8 in the S. Solfataricus ABCE1 Post-Splitting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of S. Solfataricus ABCE1 Post-Splitting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe602 b:22.7 occ:1.00 FE1 B:SF4602 0.0 22.7 1.0 S2 B:SF4602 2.2 20.2 1.0 S4 B:SF4602 2.2 20.4 1.0 S3 B:SF4602 2.2 21.1 1.0 SG B:CYS25 2.9 0.0 1.0 FE4 B:SF4602 3.1 22.6 1.0 FE2 B:SF4602 3.1 23.3 1.0 FE3 B:SF4602 3.1 23.3 1.0 CG B:PRO48 3.2 0.0 1.0 CD1 B:ILE70 3.4 0.0 1.0 S1 B:SF4602 3.8 21.6 1.0 CG1 B:ILE70 3.9 0.0 1.0 CB B:PRO48 4.0 0.0 1.0 CD B:PRO48 4.4 0.0 1.0 SG B:CYS15 4.4 0.0 1.0 CG2 B:ILE10 4.6 0.0 1.0 CB B:CYS25 4.6 0.0 1.0 CD1 B:ILE10 4.7 0.0 1.0 CB B:CYS15 4.8 0.0 1.0

Iron binding site 6 out of 8 in the S. Solfataricus ABCE1 Post-Splitting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of S. Solfataricus ABCE1 Post-Splitting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe602 b:23.3 occ:1.00 FE2 B:SF4602 0.0 23.3 1.0 S1 B:SF4602 2.2 21.6 1.0 S4 B:SF4602 2.2 20.4 1.0 S3 B:SF4602 2.2 21.1 1.0 FE4 B:SF4602 3.1 22.6 1.0 FE3 B:SF4602 3.1 23.3 1.0 FE1 B:SF4602 3.1 22.7 1.0 SG B:CYS20 3.4 0.0 1.0 SG B:CYS25 3.5 0.0 1.0 N B:LEU24 3.7 0.0 1.0 S2 B:SF4602 3.8 20.2 1.0 CA B:PHE23 3.9 0.0 1.0 C B:PHE23 4.1 0.0 1.0 N B:CYS25 4.2 0.0 1.0 CB B:LEU24 4.6 0.0 1.0 CB B:CYS25 4.6 0.0 1.0 CA B:LEU24 4.6 0.0 1.0 CB B:CYS20 4.6 0.0 1.0 CB B:PHE23 4.7 0.0 1.0 SG B:CYS15 4.7 0.0 1.0 N B:PHE23 4.8 0.0 1.0 CD2 B:PHE23 4.8 0.0 1.0 CA B:PRO17 4.9 0.0 1.0 C B:LEU24 4.9 0.0 1.0 CG B:PRO48 5.0 0.0 1.0

Iron binding site 7 out of 8 in the S. Solfataricus ABCE1 Post-Splitting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of S. Solfataricus ABCE1 Post-Splitting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe602 b:23.3 occ:1.00 FE3 B:SF4602 0.0 23.3 1.0 S1 B:SF4602 2.2 21.6 1.0 S4 B:SF4602 2.2 20.4 1.0 S2 B:SF4602 2.2 20.2 1.0 SG B:CYS65 2.8 0.0 1.0 FE2 B:SF4602 3.1 23.3 1.0 FE4 B:SF4602 3.1 22.6 1.0 FE1 B:SF4602 3.1 22.7 1.0 S3 B:SF4602 3.8 21.1 1.0 CB B:CYS65 4.0 0.0 1.0 CB B:ALA69 4.1 0.0 1.0 CB B:CYS15 4.4 0.0 1.0 CA B:CYS15 4.5 0.0 1.0 SG B:CYS15 4.5 0.0 1.0 CA B:CYS65 4.5 0.0 1.0 CD B:PRO66 4.7 0.0 1.0 CD1 B:PHE67 4.8 0.0 1.0 CD1 B:ILE70 4.9 0.0 1.0 SG B:CYS25 4.9 0.0 1.0 N B:ASN16 4.9 0.0 1.0 CG1 B:ILE70 5.0 0.0 1.0

Iron binding site 8 out of 8 in the S. Solfataricus ABCE1 Post-Splitting State


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of S. Solfataricus ABCE1 Post-Splitting State within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe602 b:22.6 occ:1.00 FE4 B:SF4602 0.0 22.6 1.0 SG B:CYS15 1.7 0.0 1.0 S3 B:SF4602 2.2 21.1 1.0 S1 B:SF4602 2.2 21.6 1.0 S2 B:SF4602 2.2 20.2 1.0 CB B:CYS15 2.7 0.0 1.0 FE2 B:SF4602 3.1 23.3 1.0 FE1 B:SF4602 3.1 22.7 1.0 FE3 B:SF4602 3.1 23.3 1.0 CA B:CYS15 3.5 0.0 1.0 N B:ASN16 3.7 0.0 1.0 S4 B:SF4602 3.7 20.4 1.0 CG B:PRO48 3.9 0.0 1.0 C B:CYS15 3.9 0.0 1.0 CD B:PRO48 4.0 0.0 1.0 CG B:PRO17 4.1 0.0 1.0 CD B:PRO17 4.1 0.0 1.0 N B:PRO17 4.2 0.0 1.0 C B:ASN16 4.5 0.0 1.0 CA B:ASN16 4.7 0.0 1.0 CA B:PRO17 4.7 0.0 1.0 N B:CYS15 4.9 0.0 1.0 CB B:PRO48 4.9 0.0 1.0 O B:CYS15 4.9 0.0 1.0

K.Kiosze-Becker, A.Ori, M.Gerovac, A.Heuer, E.Nurenberg-Goloub, U.J.Rashid, T.Becker, R.Beckmann, M.Beck, R.Tampe. Structure of the Ribosome Post-Recycling Complex Probed By Chemical Cross-Linking and Mass Spectrometry. Nat Commun V. 7 13248 2016.
ISSN: ESSN 2041-1723
PubMed: 27824037
DOI: 10.1038/NCOMMS13248