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Iron in PDB 5m0n: Crystal Structure of Cytochrome P450 Olet in Complex with Formate

Protein crystallography data

The structure of Crystal Structure of Cytochrome P450 Olet in Complex with Formate, PDB code: 5m0n was solved by K.L.Tee, A.Munro, S.Matthews, D.Leys, C.Levy, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 48.21 / 1.44
Space group P 43 21 2
Cell size a, b, c (Å), α, β, γ (°) 60.170, 60.170, 241.700, 90.00, 90.00, 90.00
R / Rfree (%) 13.5 / 17.3

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of Cytochrome P450 Olet in Complex with Formate (pdb code 5m0n). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of Cytochrome P450 Olet in Complex with Formate, PDB code: 5m0n:

Iron binding site 1 out of 1 in 5m0n

Go back to Iron Binding Sites List in 5m0n
Iron binding site 1 out of 1 in the Crystal Structure of Cytochrome P450 Olet in Complex with Formate


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Cytochrome P450 Olet in Complex with Formate within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:11.7
occ:1.00
FE A:HEM501 0.0 11.7 1.0
ND A:HEM501 2.0 11.9 1.0
NA A:HEM501 2.0 10.7 1.0
NB A:HEM501 2.0 11.5 1.0
NC A:HEM501 2.0 10.2 1.0
O A:HOH752 2.1 21.9 1.0
SG A:CYS365 2.3 12.2 1.0
C4D A:HEM501 3.0 10.9 1.0
C1D A:HEM501 3.0 10.3 1.0
C1B A:HEM501 3.0 11.1 1.0
C4B A:HEM501 3.0 11.2 1.0
C1A A:HEM501 3.0 10.5 1.0
C4A A:HEM501 3.0 11.0 1.0
C1C A:HEM501 3.1 11.2 1.0
C4C A:HEM501 3.1 11.6 1.0
CB A:CYS365 3.3 12.1 1.0
CHB A:HEM501 3.4 12.3 1.0
CHC A:HEM501 3.4 10.9 1.0
CHD A:HEM501 3.4 10.6 1.0
CHA A:HEM501 3.4 9.7 1.0
O A:HOH652 3.9 25.8 1.0
CA A:CYS365 4.0 10.6 1.0
C3D A:HEM501 4.2 11.2 1.0
C2B A:HEM501 4.2 13.2 1.0
C2D A:HEM501 4.3 10.6 1.0
C3B A:HEM501 4.3 12.1 1.0
C2A A:HEM501 4.3 11.8 1.0
C3A A:HEM501 4.3 11.3 1.0
C2C A:HEM501 4.3 12.3 1.0
C3C A:HEM501 4.3 12.8 1.0
OE1 A:GLN354 4.4 14.0 1.0
CB A:PRO246 4.5 13.7 1.0
N A:ALA366 4.7 10.7 1.0
C A:CYS365 4.7 11.2 1.0
N A:GLY367 4.8 11.8 1.0
CG A:PRO246 4.9 14.6 1.0

Reference:

S.Matthews, J.D.Belcher, K.L.Tee, H.M.Girvan, K.J.Mclean, S.E.Rigby, C.W.Levy, D.Leys, D.A.Parker, R.T.Blankley, A.W.Munro. Catalytic Determinants of Alkene Production By the Cytochrome P450 Peroxygenase Oletje. J. Biol. Chem. V. 292 5128 2017.
ISSN: ESSN 1083-351X
PubMed: 28053093
DOI: 10.1074/JBC.M116.762336
Page generated: Tue Aug 6 04:53:12 2024

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