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Iron in PDB 5mba: Binding Mode of Azide to Ferric Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.9 Angstroms Resolution

Protein crystallography data

The structure of Binding Mode of Azide to Ferric Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.9 Angstroms Resolution, PDB code: 5mba was solved by M.Bolognesi, S.Onesti, G.Gatti, A.Coda, P.Ascenzi, M.Brunori, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) N/A / 1.90
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 52.980, 70.700, 32.500, 90.00, 90.00, 90.00
R / Rfree (%) n/a / n/a

Iron Binding Sites:

The binding sites of Iron atom in the Binding Mode of Azide to Ferric Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.9 Angstroms Resolution (pdb code 5mba). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Binding Mode of Azide to Ferric Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.9 Angstroms Resolution, PDB code: 5mba:

Iron binding site 1 out of 1 in 5mba

Go back to Iron Binding Sites List in 5mba
Iron binding site 1 out of 1 in the Binding Mode of Azide to Ferric Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.9 Angstroms Resolution


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Binding Mode of Azide to Ferric Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.9 Angstroms Resolution within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe148

b:12.9
occ:1.00
FE A:HEM148 0.0 12.9 1.0
NC A:HEM148 1.9 19.5 1.0
NA A:HEM148 1.9 8.1 1.0
NB A:HEM148 2.0 17.4 1.0
NE2 A:HIS95 2.0 11.9 1.0
ND A:HEM148 2.1 11.4 1.0
N3 A:AZI149 2.1 15.9 1.0
C4C A:HEM148 2.9 30.1 1.0
C4A A:HEM148 2.9 6.7 1.0
N2 A:AZI149 2.9 18.3 1.0
C1C A:HEM148 3.0 16.1 1.0
C1A A:HEM148 3.0 12.1 1.0
C1B A:HEM148 3.0 7.5 1.0
C1D A:HEM148 3.1 10.1 1.0
CE1 A:HIS95 3.1 10.4 1.0
CD2 A:HIS95 3.1 14.4 1.0
C4B A:HEM148 3.1 9.7 1.0
C4D A:HEM148 3.1 9.8 1.0
CHB A:HEM148 3.3 8.2 1.0
CHD A:HEM148 3.3 22.8 1.0
CHC A:HEM148 3.4 10.2 1.0
CHA A:HEM148 3.5 20.2 1.0
N1 A:AZI149 3.9 21.5 1.0
C3C A:HEM148 4.2 9.8 1.0
C3A A:HEM148 4.2 10.4 1.0
CG A:HIS95 4.2 18.1 1.0
ND1 A:HIS95 4.2 15.4 1.0
C2A A:HEM148 4.2 26.5 1.0
C2C A:HEM148 4.2 10.2 1.0
C2B A:HEM148 4.3 8.8 1.0
C3B A:HEM148 4.3 5.0 1.0
C2D A:HEM148 4.3 6.2 1.0
C3D A:HEM148 4.4 17.9 1.0
CG1 A:ILE67 4.7 12.5 1.0
CZ A:PHE43 4.9 28.0 1.0

Reference:

A.Mattevi, G.Gatti, A.Coda, M.Rizzi, P.Ascenzi, M.Brunori, M.Bolognesi. Binding Mode of Azide to Ferric Aplysia Limacina Myoglobin. Crystallographic Analysis at 1.9 A Resolution. J.Mol.Recog. V. 4 1 1991.
ISSN: ISSN 0952-3499
PubMed: 1931125
DOI: 10.1002/JMR.300040102
Page generated: Tue Aug 5 23:52:23 2025

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