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Iron in PDB 5mwu: Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)(Co)2CL

Protein crystallography data

The structure of Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)(Co)2CL, PDB code: 5mwu was solved by C.Cavazza, S.Lopez, L.Rondot, M.Iannello, E.Boeri-Erba, N.Burzlaff, F.Strinitz, A.Jorge-Robin, C.Marchi-Delapierre, S.Menage, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 46.80 / 1.80
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 86.303, 93.606, 124.211, 90.00, 90.00, 90.00
R / Rfree (%) 16.8 / 20.8

Other elements in 5mwu:

The structure of Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)(Co)2CL also contains other interesting chemical elements:

Ruthenium (Ru) 1 atom
Chlorine (Cl) 2 atoms

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)(Co)2CL (pdb code 5mwu). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)(Co)2CL, PDB code: 5mwu:

Iron binding site 1 out of 1 in 5mwu

Go back to Iron Binding Sites List in 5mwu
Iron binding site 1 out of 1 in the Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)(Co)2CL


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Periplasmic Nickel-Binding Protein Nika From Escherichia Coli in Complex with Ru(Bpza)(Co)2CL within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe608

b:23.1
occ:1.00
O20 A:EDT609 2.0 30.4 1.0
O A:HOH703 2.1 33.2 1.0
O13 A:EDT609 2.1 26.4 1.0
O16 A:EDT609 2.2 27.5 1.0
O18 A:EDT609 2.2 23.9 1.0
N3 A:EDT609 2.3 24.8 1.0
N8 A:EDT609 2.3 27.5 1.0
C5 A:EDT609 2.9 29.0 1.0
C12 A:EDT609 2.9 28.6 1.0
C1 A:EDT609 3.0 21.4 1.0
C10 A:EDT609 3.0 33.5 1.0
C11 A:EDT609 3.0 27.3 1.0
C9 A:EDT609 3.1 27.3 1.0
C4 A:EDT609 3.1 25.6 1.0
C6 A:EDT609 3.1 24.4 1.0
C2 A:EDT609 3.1 24.2 1.0
C7 A:EDT609 3.3 25.9 1.0
O A:HOH923 3.8 44.5 1.0
O19 A:EDT609 4.1 29.3 1.0
O14 A:EDT609 4.1 30.8 1.0
O15 A:EDT609 4.2 31.6 1.0
NH2 A:ARG137 4.2 19.2 1.0
O17 A:EDT609 4.2 23.3 1.0
O A:HOH795 4.6 42.4 1.0
SD A:MET27 4.8 23.3 0.4
CE A:MET27 4.8 24.6 0.6

Reference:

S.Lopez, L.Rondot, C.Cavazza, M.Iannello, E.Boeri-Erba, N.Burzlaff, N.Strinitz, A.Jorge-Robin, C.Marchi-Delapierre, S.Menage. Efficient Conversion of Alkenes to Chlorohydrins By A Ru-Based Artificial Enzyme To Be Published.
Page generated: Sun Dec 13 16:08:59 2020

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