Iron »
PDB 5tis-5ufj »
5tis »
Iron in PDB 5tis: Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
Enzymatic activity of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
All present enzymatic activity of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex:
1.10.3.9;
1.10.3.9;
Protein crystallography data
The structure of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex, PDB code: 5tis
was solved by
I.D.Young,
M.Ibrahim,
R.Chatterjee,
S.Gul,
F.Fuller,
S.Koroidov,
A.S.Brewster,
R.Tran,
R.Alonso-Mori,
T.Kroll,
T.Michels-Clark,
H.Laksmono,
R.G.Sierra,
C.A.Stan,
R.Hussein,
M.Zhang,
L.Douthit,
M.Kubin,
C.De Lichtenberg,
L.V.Pham,
H.Nilsson,
M.H.Cheah,
D.Shevela,
C.Saracini,
M.A.Bean,
I.Seuffert,
D.Sokaras,
T.-C.Weng,
E.Pastor,
C.Weninger,
T.Fransson,
L.Lassalle,
P.Braeuer,
P.Aller,
P.T.Docker,
B.Andi,
A.M.Orville,
J.M.Glownia,
S.Nelson,
M.Sikorski,
D.Zhu,
M.S.Hunter,
A.Aquila,
J.E.Koglin,
J.Robinson,
M.Liang,
S.Boutet,
A.Y.Lyubimov,
M.Uervirojnangkoorn,
N.W.Moriarty,
D.Liebschner,
P.V.Afonine,
D.G.Watermann,
G.Evans,
P.Wernet,
H.Dobbek,
W.I.Weis,
A.T.Brunger,
P.H.Zwart,
P.D.Adams,
A.Zouni,
J.Messinger,
U.Bergmann,
N.K.Sauter,
J.Kern,
V.K.Yachandra,
J.Yano,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
| Resolution Low / High (Å) | 44.28 / 2.25 |
| Space group | P 21 21 21 |
| Cell size a, b, c (Å), α, β, γ (°) | 117.870, 223.140, 310.710, 90.00, 90.00, 90.00 |
| R / Rfree (%) | 19.3 / 23.1 |
Other elements in 5tis:
The structure of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex also contains other interesting chemical elements:
| Magnesium | (Mg) | 70 atoms |
| Manganese | (Mn) | 8 atoms |
| Calcium | (Ca) | 2 atoms |
| Chlorine | (Cl) | 4 atoms |
Iron Binding Sites:
The binding sites of Iron atom in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
(pdb code 5tis). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 6 binding sites of Iron where determined in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex, PDB code: 5tis:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;
In total 6 binding sites of Iron where determined in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex, PDB code: 5tis:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6;
Iron binding site 1 out of 6 in 5tis
Go back to
Iron Binding Sites List in 5tis
Iron binding site 1 out
of 6 in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 1 of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex within 5.0Å range:
|
Iron binding site 2 out of 6 in 5tis
Go back to
Iron Binding Sites List in 5tis
Iron binding site 2 out
of 6 in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 2 of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex within 5.0Å range:
|
Iron binding site 3 out of 6 in 5tis
Go back to
Iron Binding Sites List in 5tis
Iron binding site 3 out
of 6 in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 3 of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex within 5.0Å range:
|
Iron binding site 4 out of 6 in 5tis
Go back to
Iron Binding Sites List in 5tis
Iron binding site 4 out
of 6 in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 4 of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex within 5.0Å range:
|
Iron binding site 5 out of 6 in 5tis
Go back to
Iron Binding Sites List in 5tis
Iron binding site 5 out
of 6 in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 5 of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex within 5.0Å range:
|
Iron binding site 6 out of 6 in 5tis
Go back to
Iron Binding Sites List in 5tis
Iron binding site 6 out
of 6 in the Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex
Mono view
Stereo pair view
Mono view
Stereo pair view
A full contact list of Iron with other atoms in the Fe binding
site number 6 of Room Temperature Xfel Structure of the Native, Doubly-Illuminated Photosystem II Complex within 5.0Å range:
|
Reference:
I.D.Young,
M.Ibrahim,
R.Chatterjee,
S.Gul,
F.D.Fuller,
S.Koroidov,
A.S.Brewster,
R.Tran,
R.Alonso-Mori,
T.Kroll,
T.Michels-Clark,
H.Laksmono,
R.G.Sierra,
C.A.Stan,
R.Hussein,
M.Zhang,
L.Douthit,
M.Kubin,
C.De Lichtenberg,
L.Vo Pham,
H.Nilsson,
M.H.Cheah,
D.Shevela,
C.Saracini,
M.A.Bean,
I.Seuffert,
D.Sokaras,
T.C.Weng,
E.Pastor,
C.Weninger,
T.Fransson,
L.Lassalle,
P.Brauer,
P.Aller,
P.T.Docker,
B.Andi,
A.M.Orville,
J.M.Glownia,
S.Nelson,
M.Sikorski,
D.Zhu,
M.S.Hunter,
T.J.Lane,
A.Aquila,
J.E.Koglin,
J.Robinson,
M.Liang,
S.Boutet,
A.Y.Lyubimov,
M.Uervirojnangkoorn,
N.W.Moriarty,
D.Liebschner,
P.V.Afonine,
D.G.Waterman,
G.Evans,
P.Wernet,
H.Dobbek,
W.I.Weis,
A.T.Brunger,
P.H.Zwart,
P.D.Adams,
A.Zouni,
J.Messinger,
U.Bergmann,
N.K.Sauter,
J.Kern,
V.K.Yachandra,
J.Yano.
Structure of Photosystem II and Substrate Binding at Room Temperature. Nature V. 540 453 2016.
ISSN: ESSN 1476-4687
PubMed: 27871088
DOI: 10.1038/NATURE20161
Page generated: Tue Aug 6 09:41:16 2024
ISSN: ESSN 1476-4687
PubMed: 27871088
DOI: 10.1038/NATURE20161
Last articles
Zn in 9MJ5Zn in 9HNW
Zn in 9G0L
Zn in 9FNE
Zn in 9DZN
Zn in 9E0I
Zn in 9D32
Zn in 9DAK
Zn in 8ZXC
Zn in 8ZUF
