Iron in PDB 5v3t: Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis

The structure of Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis, PDB code: 5v3t was solved by C.L.Varnado, E.Sorelle, J.Soman, J.S.Olson, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	56.28 / 1.90
Space group	C 2 2 21
Cell size a, b, c (Å), α, β, γ (°)	49.770, 122.170, 112.560, 90.00, 90.00, 90.00
R / Rfree (%)	19 / 21.8

The binding sites of Iron atom in the Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis (pdb code 5v3t). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis, PDB code: 5v3t:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe201 b:33.8 occ:1.00 FE A:HEM201 0.0 33.8 1.0 C A:CYN202 2.0 34.3 1.0 NC A:HEM201 2.1 33.3 1.0 NA A:HEM201 2.1 38.5 1.0 NB A:HEM201 2.1 30.0 1.0 ND A:HEM201 2.1 29.9 1.0 NE2 A:HIS77 2.1 33.2 1.0 CE1 A:HIS77 3.0 33.6 1.0 C1C A:HEM201 3.1 27.1 1.0 C4B A:HEM201 3.1 27.7 1.0 C1A A:HEM201 3.1 41.6 1.0 C4C A:HEM201 3.1 37.6 1.0 C1D A:HEM201 3.1 34.0 1.0 C4A A:HEM201 3.1 39.1 1.0 C4D A:HEM201 3.1 39.2 1.0 C1B A:HEM201 3.1 34.1 1.0 N A:CYN202 3.1 33.8 1.0 CD2 A:HIS77 3.2 31.7 1.0 CHC A:HEM201 3.4 29.6 1.0 CHA A:HEM201 3.5 35.5 1.0 CHD A:HEM201 3.5 36.8 1.0 CHB A:HEM201 3.5 35.3 1.0 ND1 A:HIS77 4.2 32.8 1.0 CG A:HIS77 4.3 35.8 1.0 C2C A:HEM201 4.3 35.6 1.0 C3C A:HEM201 4.3 39.1 1.0 C2A A:HEM201 4.3 44.8 1.0 C3A A:HEM201 4.3 42.7 1.0 C3B A:HEM201 4.3 29.8 1.0 C2D A:HEM201 4.3 31.4 1.0 C3D A:HEM201 4.3 39.1 1.0 C2B A:HEM201 4.3 32.1 1.0 NE1 A:TRP90 4.7 32.0 1.0

Iron binding site 2 out of 2 in the Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe201 b:28.7 occ:1.00 FE B:HEM201 0.0 28.7 1.0 NB B:HEM201 2.0 26.8 1.0 NE2 B:HIS77 2.0 26.6 1.0 NA B:HEM201 2.0 27.9 1.0 C B:CYN202 2.1 38.8 1.0 NC B:HEM201 2.1 27.0 1.0 ND B:HEM201 2.1 33.5 1.0 CD2 B:HIS77 3.0 30.8 1.0 C1B B:HEM201 3.0 29.5 1.0 C4B B:HEM201 3.0 28.3 1.0 C1C B:HEM201 3.0 22.8 1.0 C4A B:HEM201 3.0 31.0 1.0 CE1 B:HIS77 3.1 31.1 1.0 C1A B:HEM201 3.1 28.4 1.0 C1D B:HEM201 3.1 31.5 1.0 C4D B:HEM201 3.1 31.0 1.0 C4C B:HEM201 3.2 30.4 1.0 N B:CYN202 3.2 29.7 1.0 CHC B:HEM201 3.4 29.6 1.0 CHB B:HEM201 3.4 24.7 1.0 CHD B:HEM201 3.5 25.7 1.0 CHA B:HEM201 3.5 25.6 1.0 ND1 B:HIS77 4.1 27.1 1.0 CG B:HIS77 4.1 28.6 1.0 C2B B:HEM201 4.3 27.5 1.0 C3B B:HEM201 4.3 27.7 1.0 C3A B:HEM201 4.3 29.7 1.0 C2A B:HEM201 4.3 31.3 1.0 C2C B:HEM201 4.3 24.2 1.0 C3C B:HEM201 4.3 24.5 1.0 C2D B:HEM201 4.3 32.6 1.0 C3D B:HEM201 4.4 30.9 1.0 NE1 B:TRP90 4.6 29.8 1.0 NE2 B:GLN50 5.0 32.7 1.0

C.L.Varnado, E.Sorelle, J.Soman, J.S.Olson. Crystal Structure of the Group II Truncated Hemoglobin From Bacillus Anthracis To Be Published.