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Atomistry » Iron » PDB 5why-5xbp » 5x1b | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Atomistry » Iron » PDB 5why-5xbp » 5x1b » |
Iron in PDB 5x1b: Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction CenterEnzymatic activity of Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center
All present enzymatic activity of Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center:
1.9.3.1; Protein crystallography data
The structure of Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center, PDB code: 5x1b
was solved by
A.Shimada,
M.Kubo,
S.Baba,
K.Yamashita,
K.Hirata,
G.Ueno,
T.Nomura,
T.Kimura,
K.Shinzawa-Itoh,
J.Baba,
K.Hatano,
Y.Eto,
A.Miyamoto,
H.Murakami,
T.Kumasaka,
S.Owada,
K.Tono,
M.Yabashi,
Y.Yamaguchi,
S.Yanagisawa,
M.Sakaguchi,
T.Ogura,
R.Komiya,
J.Yan,
E.Yamashita,
M.Yamamoto,
H.Ago,
S.Yoshikawa,
T.Tsukihara,
with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:
Other elements in 5x1b:
The structure of Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center also contains other interesting chemical elements:
Iron Binding Sites:
The binding sites of Iron atom in the Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center
(pdb code 5x1b). This binding sites where shown within
5.0 Angstroms radius around Iron atom.
In total 4 binding sites of Iron where determined in the Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center, PDB code: 5x1b: Jump to Iron binding site number: 1; 2; 3; 4; Iron binding site 1 out of 4 in 5x1bGo back to Iron Binding Sites List in 5x1b
Iron binding site 1 out
of 4 in the Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center
Mono view Stereo pair view
Iron binding site 2 out of 4 in 5x1bGo back to Iron Binding Sites List in 5x1b
Iron binding site 2 out
of 4 in the Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center
Mono view Stereo pair view
Iron binding site 3 out of 4 in 5x1bGo back to Iron Binding Sites List in 5x1b
Iron binding site 3 out
of 4 in the Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center
Mono view Stereo pair view
Iron binding site 4 out of 4 in 5x1bGo back to Iron Binding Sites List in 5x1b
Iron binding site 4 out
of 4 in the Co Bound Cytochrome C Oxidase at 20 Nsec After Pump Laser Irradiation to Release Co From O2 Reduction Center
Mono view Stereo pair view
Reference:
A.Shimada,
M.Kubo,
S.Baba,
K.Yamashita,
K.Hirata,
G.Ueno,
T.Nomura,
T.Kimura,
K.Shinzawa-Itoh,
J.Baba,
K.Hatano,
Y.Eto,
A.Miyamoto,
H.Murakami,
T.Kumasaka,
S.Owada,
K.Tono,
M.Yabashi,
Y.Yamaguchi,
S.Yanagisawa,
M.Sakaguchi,
T.Ogura,
R.Komiya,
J.Yan,
E.Yamashita,
M.Yamamoto,
H.Ago,
S.Yoshikawa,
T.Tsukihara.
A Nanosecond Time-Resolved Xfel Analysis of Structural Changes Associated with Co Release From Cytochrome C Oxidase. Sci Adv V. 3 03042 2017.
Page generated: Tue Aug 6 11:28:27 2024
ISSN: ESSN 2375-2548 PubMed: 28740863 DOI: 10.1126/SCIADV.1603042 |
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