Iron in PDB 5yl6: Crystal Structure of OFD2 in Complex with 2OG From Schizosaccharomyces Pombe

The structure of Crystal Structure of OFD2 in Complex with 2OG From Schizosaccharomyces Pombe, PDB code: 5yl6 was solved by J.Wang, Y.X.Gao, G.R.Guo, Z.L.Zhu, M.K.Teng, L.W.Niu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	57.58 / 2.00
Space group	I 2 2 2
Cell size a, b, c (Å), α, β, γ (°)	71.114, 80.312, 82.607, 90.00, 90.00, 90.00
R / Rfree (%)	20 / 24.7

The binding sites of Iron atom in the Crystal Structure of OFD2 in Complex with 2OG From Schizosaccharomyces Pombe (pdb code 5yl6). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of OFD2 in Complex with 2OG From Schizosaccharomyces Pombe, PDB code: 5yl6:

Iron binding site 1 out of 1 in the Crystal Structure of OFD2 in Complex with 2OG From Schizosaccharomyces Pombe


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of OFD2 in Complex with 2OG From Schizosaccharomyces Pombe within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe301 b:37.6 occ:1.00 NE2 A:HIS186 2.1 30.8 1.0 O2 A:AKG302 2.1 49.8 1.0 OD1 A:ASP134 2.1 41.3 1.0 NE2 A:HIS132 2.2 43.2 1.0 O A:HOH425 2.2 34.5 1.0 O5 A:AKG302 2.3 46.1 1.0 C1 A:AKG302 2.7 63.5 0.8 C2 A:AKG302 2.8 59.2 0.8 CE1 A:HIS186 3.0 28.3 1.0 CE1 A:HIS132 3.0 38.6 1.0 CG A:ASP134 3.1 41.3 1.0 CD2 A:HIS186 3.1 29.6 1.0 CD2 A:HIS132 3.2 37.9 1.0 OD2 A:ASP134 3.3 39.0 1.0 O A:HOH402 3.8 59.6 1.0 O1 A:AKG302 3.9 61.7 0.8 ND1 A:HIS186 4.1 34.1 1.0 ND1 A:HIS132 4.1 34.3 1.0 CG A:HIS186 4.2 30.9 1.0 C3 A:AKG302 4.3 54.0 1.0 CG A:HIS132 4.3 36.0 1.0 CB A:ASP134 4.5 39.7 1.0 NH1 A:ARG216 4.7 48.4 1.0 CA A:ASP134 4.8 37.2 1.0 C4 A:AKG302 4.8 53.4 1.0 N A:ASP134 4.8 30.9 1.0 O A:ACT303 4.9 38.1 1.0

J.Wang, Y.X.Gao, G.R.Guo, Z.L.Zhu, L.W.Niu, M.K.Teng. Crystal Structure of OFD2 in Complex with 2OG From Schizosaccharomyces Pombe To Be Published.