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Iron in PDB 5yqa: The Crystal Structure of CYP199A4 Binding with 4-N-Propyl Benzoic Acid

Protein crystallography data

The structure of The Crystal Structure of CYP199A4 Binding with 4-N-Propyl Benzoic Acid, PDB code: 5yqa was solved by W.Zhou, T.Zhang, R.Qiao, S.Bell, T.Coleman, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 33.35 / 1.38
Space group P 1 21 1
Cell size a, b, c (Å), α, β, γ (°) 43.860, 51.377, 79.588, 90.00, 92.07, 90.00
R / Rfree (%) 17.9 / 19.6

Other elements in 5yqa:

The structure of The Crystal Structure of CYP199A4 Binding with 4-N-Propyl Benzoic Acid also contains other interesting chemical elements:

Chlorine (Cl) 1 atom

Iron Binding Sites:

The binding sites of Iron atom in the The Crystal Structure of CYP199A4 Binding with 4-N-Propyl Benzoic Acid (pdb code 5yqa). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the The Crystal Structure of CYP199A4 Binding with 4-N-Propyl Benzoic Acid, PDB code: 5yqa:

Iron binding site 1 out of 1 in 5yqa

Go back to Iron Binding Sites List in 5yqa
Iron binding site 1 out of 1 in the The Crystal Structure of CYP199A4 Binding with 4-N-Propyl Benzoic Acid


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of The Crystal Structure of CYP199A4 Binding with 4-N-Propyl Benzoic Acid within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe501

b:9.6
occ:1.00
FE A:HEM501 0.0 9.6 1.0
NC A:HEM501 2.0 8.9 1.0
ND A:HEM501 2.0 9.1 1.0
NB A:HEM501 2.1 7.9 1.0
NA A:HEM501 2.1 9.5 1.0
SG A:CYS358 2.4 9.6 1.0
C4C A:HEM501 3.0 8.1 1.0
C1D A:HEM501 3.1 8.5 1.0
C4B A:HEM501 3.1 8.7 1.0
C1C A:HEM501 3.1 9.8 1.0
C4D A:HEM501 3.1 8.5 1.0
C1B A:HEM501 3.1 8.9 1.0
C1A A:HEM501 3.1 9.8 1.0
C4A A:HEM501 3.1 9.5 1.0
CB A:CYS358 3.3 8.6 1.0
CHC A:HEM501 3.4 9.5 1.0
CHD A:HEM501 3.4 8.8 1.0
CHA A:HEM501 3.4 8.7 1.0
CHB A:HEM501 3.5 10.0 1.0
C9 A:8ZU502 3.8 13.8 1.0
C10 A:8ZU502 3.9 14.7 1.0
CA A:CYS358 3.9 9.3 1.0
C3C A:HEM501 4.3 8.9 1.0
C2C A:HEM501 4.3 9.5 1.0
C3B A:HEM501 4.3 9.4 1.0
C2D A:HEM501 4.3 9.5 1.0
C3D A:HEM501 4.3 9.2 1.0
C2B A:HEM501 4.3 10.3 1.0
C2A A:HEM501 4.3 8.8 1.0
C3A A:HEM501 4.3 9.5 1.0
C A:CYS358 4.7 7.8 1.0
N A:GLY360 4.7 10.1 1.0
O A:ALA248 4.8 13.9 1.0
N A:VAL359 4.8 9.4 1.0
CB A:ALA248 4.9 12.6 1.0

Reference:

T.Coleman, T.Zhang, R.Qiao, W.Zhou, S.Beii. The Crystal Structure of CYP199A4 Binding with 4-N-Propyl Benzoic Acid To Be Published.
Page generated: Sun Dec 13 16:18:44 2020

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