Iron in PDB 5ywh: Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508

All present enzymatic activity of Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508:
1.13.11.27;

The structure of Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508, PDB code: 5ywh was solved by W.C.Yang, H.Y.Lin, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	29.49 / 2.72
Space group	P 41 21 2
Cell size a, b, c (Å), α, β, γ (°)	95.745, 95.745, 196.595, 90.00, 90.00, 90.00
R / Rfree (%)	24.1 / 29.7

The binding sites of Iron atom in the Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508 (pdb code 5ywh). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508, PDB code: 5ywh:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in the Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe501 b:9.8 occ:1.00 OE1 A:GLU394 2.0 16.4 1.0 O12 A:92U502 2.3 32.5 1.0 NE2 A:HIS226 2.4 11.0 1.0 NE2 A:HIS308 2.4 10.2 1.0 O17 A:92U502 2.5 25.0 1.0 CD A:GLU394 3.1 21.0 1.0 CE1 A:HIS226 3.2 13.7 1.0 CE1 A:HIS308 3.2 12.5 1.0 C10 A:92U502 3.4 34.4 1.0 CD2 A:HIS226 3.4 8.8 1.0 OE2 A:GLU394 3.4 15.0 1.0 CD2 A:HIS308 3.5 9.9 1.0 C13 A:92U502 3.6 32.1 1.0 C11 A:92U502 3.9 26.6 1.0 ND1 A:HIS226 4.4 12.9 1.0 ND1 A:HIS308 4.4 16.6 1.0 CG A:GLU394 4.4 17.6 1.0 CG2 A:VAL228 4.5 8.4 1.0 CG A:HIS226 4.5 9.0 1.0 CE1 A:PHE381 4.5 25.2 1.0 CG A:HIS308 4.5 15.2 1.0 O A:PHE419 4.6 19.2 1.0 CB A:ALA310 4.6 6.1 1.0 C02 A:92U502 4.6 36.6 1.0 CB A:GLU394 4.7 16.1 1.0 N14 A:92U502 4.8 52.3 1.0 CD1 A:PHE419 4.9 25.9 1.0 CB A:PHE419 5.0 18.0 1.0

Iron binding site 2 out of 2 in the Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508 within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe501 b:7.1 occ:1.00 OE1 B:GLU394 1.9 20.0 1.0 O12 B:92U502 1.9 28.1 1.0 O17 B:92U502 2.4 22.3 1.0 NE2 B:HIS226 2.5 7.2 1.0 NE2 B:HIS308 2.6 8.9 1.0 CD B:GLU394 2.8 18.7 1.0 C10 B:92U502 2.9 26.8 1.0 OE2 B:GLU394 3.2 10.9 1.0 C13 B:92U502 3.2 22.2 1.0 CD2 B:HIS226 3.4 6.8 1.0 C11 B:92U502 3.4 22.9 1.0 CE1 B:HIS308 3.5 12.2 1.0 CE1 B:HIS226 3.5 8.0 1.0 CD2 B:HIS308 3.6 8.6 1.0 CG B:GLU394 4.2 11.8 1.0 C02 B:92U502 4.2 19.6 1.0 CG2 B:VAL228 4.4 8.4 1.0 CB B:GLU394 4.5 12.0 1.0 N14 B:92U502 4.5 46.7 1.0 O B:PHE419 4.6 18.3 1.0 CG B:HIS226 4.6 7.5 1.0 CB B:ALA310 4.6 10.2 1.0 ND1 B:HIS226 4.6 5.1 1.0 CD2 B:PHE419 4.6 10.6 1.0 ND1 B:HIS308 4.6 13.6 1.0 CE1 B:PHE381 4.7 18.5 1.0 CG B:HIS308 4.7 10.7 1.0 C01 B:92U502 4.8 22.5 1.0 CB B:PHE419 4.8 13.6 1.0 C16 B:92U502 4.8 31.3 1.0

W.C.Yang, H.Y.Lin. Crystal Structure of Arabidopsis Thaliana Hppd Complexed with Y13508 To Be Published.