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Iron in PDB 5zbf: Crystal Structure of 4-Hydroxyphenylpyruvic Acid Bound Aere From Microcystis Aeruginosa

Protein crystallography data

The structure of Crystal Structure of 4-Hydroxyphenylpyruvic Acid Bound Aere From Microcystis Aeruginosa, PDB code: 5zbf was solved by X.Qiu, W.Zhu, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å) 45.00 / 1.60
Space group P 21 21 21
Cell size a, b, c (Å), α, β, γ (°) 34.804, 40.103, 148.704, 90.00, 90.00, 90.00
R / Rfree (%) 15.2 / 19.5

Iron Binding Sites:

The binding sites of Iron atom in the Crystal Structure of 4-Hydroxyphenylpyruvic Acid Bound Aere From Microcystis Aeruginosa (pdb code 5zbf). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total only one binding site of Iron was determined in the Crystal Structure of 4-Hydroxyphenylpyruvic Acid Bound Aere From Microcystis Aeruginosa, PDB code: 5zbf:

Iron binding site 1 out of 1 in 5zbf

Go back to Iron Binding Sites List in 5zbf
Iron binding site 1 out of 1 in the Crystal Structure of 4-Hydroxyphenylpyruvic Acid Bound Aere From Microcystis Aeruginosa


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of 4-Hydroxyphenylpyruvic Acid Bound Aere From Microcystis Aeruginosa within 5.0Å range:
probe atom residue distance (Å) B Occ
A:Fe302

b:21.4
occ:0.70
O4 A:ENO301 2.1 34.4 1.0
NE2 A:GLN49 2.1 28.3 1.0
NE2 A:HIS84 2.1 28.8 1.0
NE2 A:HIS45 2.2 35.4 1.0
NE2 A:HIS43 2.2 40.6 1.0
O1 A:ENO301 2.2 33.6 1.0
C2 A:ENO301 2.8 35.1 1.0
C1 A:ENO301 2.9 35.2 1.0
CE1 A:HIS84 3.0 27.6 1.0
CE1 A:HIS43 3.1 35.9 1.0
CD A:GLN49 3.1 29.3 1.0
CE1 A:HIS45 3.1 29.3 1.0
CD2 A:HIS45 3.2 36.3 1.0
CD2 A:HIS84 3.2 23.8 1.0
CD2 A:HIS43 3.2 38.1 1.0
OE1 A:GLN49 3.4 31.5 1.0
O2 A:ENO301 4.1 45.0 1.0
ND1 A:HIS84 4.2 25.8 1.0
ND1 A:HIS43 4.2 43.2 1.0
C3 A:ENO301 4.2 38.7 1.0
ND1 A:HIS45 4.3 34.7 1.0
CG A:HIS84 4.3 22.9 1.0
CG A:HIS43 4.3 38.5 1.0
CG A:HIS45 4.3 36.1 1.0
CG A:GLN49 4.5 24.4 1.0
C5 A:ENO301 4.5 41.2 1.0
NZ A:LYS100 4.5 42.3 1.0
C4 A:ENO301 4.6 43.3 1.0
CB A:GLN49 4.8 22.6 1.0
CE A:LYS100 4.8 41.1 1.0
CD A:LYS100 5.0 37.2 1.0

Reference:

X.Qiu, W.Zhu, W.Wang, H.Jin, P.Zhu, R.Zhuang, X.Yan. Structural and Functional Insights Into the Role of A Cupin Superfamily Isomerase in the Biosynthesis of Choi Moiety of Aeruginosin. J. Struct. Biol. V. 205 44 2019.
ISSN: ESSN 1095-8657
PubMed: 30742895
DOI: 10.1016/J.JSB.2019.01.007
Page generated: Tue Aug 6 13:02:20 2024

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