Iron in PDB 5ziq: Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4

The structure of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4, PDB code: 5ziq was solved by J.Kim, Y.Fukuda, T.Inoue, with X-Ray Crystallography technique. A brief refinement statistics is given in the table below:

Resolution Low / High (Å)	50.01 / 1.50
Space group	P 1
Cell size a, b, c (Å), α, β, γ (°)	43.359, 59.185, 67.521, 115.36, 97.98, 97.43
R / Rfree (%)	14.7 / 19.4

The binding sites of Iron atom in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 (pdb code 5ziq). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 8 binding sites of Iron where determined in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4, PDB code: 5ziq:
Jump to Iron binding site number: 1; 2; 3; 4; 5; 6; 7; 8;

Iron binding site 1 out of 8 in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1001 b:11.0 occ:0.50 FE A:HEM1001 0.0 11.0 0.5 FE A:HEM1001 0.1 11.2 0.5 ND A:HEM1001 1.9 12.1 0.5 ND A:HEM1001 1.9 11.9 0.5 NA A:HEM1001 2.0 12.3 0.5 NA A:HEM1001 2.0 12.1 0.5 NE2 A:HIS135 2.0 10.5 1.0 NC A:HEM1001 2.1 9.8 0.5 NB A:HEM1001 2.1 11.8 0.5 NB A:HEM1001 2.1 10.8 0.5 NC A:HEM1001 2.1 11.5 0.5 NE2 A:HIS107 2.1 9.6 1.0 C4D A:HEM1001 2.9 12.9 0.5 C4D A:HEM1001 2.9 12.6 0.5 C1D A:HEM1001 2.9 10.8 0.5 C1D A:HEM1001 2.9 12.5 0.5 C1A A:HEM1001 3.0 13.3 0.5 CE1 A:HIS135 3.0 11.0 1.0 C4A A:HEM1001 3.0 12.0 0.5 C1A A:HEM1001 3.0 13.0 0.5 C4B A:HEM1001 3.0 11.6 0.5 CD2 A:HIS107 3.0 10.3 1.0 C1B A:HEM1001 3.0 12.6 0.5 C4C A:HEM1001 3.0 9.9 0.5 C4A A:HEM1001 3.0 12.7 0.5 C1B A:HEM1001 3.0 11.5 0.5 CD2 A:HIS135 3.1 11.4 1.0 C4B A:HEM1001 3.1 11.0 0.5 C1C A:HEM1001 3.1 9.6 0.5 C4C A:HEM1001 3.1 11.8 0.5 CE1 A:HIS107 3.1 11.3 1.0 C1C A:HEM1001 3.1 11.0 0.5 CHA A:HEM1001 3.3 14.1 0.5 CHA A:HEM1001 3.4 13.8 0.5 CHD A:HEM1001 3.4 10.2 0.5 CHB A:HEM1001 3.4 12.6 0.5 CHB A:HEM1001 3.4 11.5 0.5 CHD A:HEM1001 3.4 11.9 0.5 CHC A:HEM1001 3.4 11.3 0.5 CHC A:HEM1001 3.5 11.4 0.5 ND1 A:HIS135 4.1 11.7 1.0 ND1 A:HIS107 4.1 11.3 1.0 CG A:HIS107 4.1 10.7 1.0 C2A A:HEM1001 4.2 13.8 0.5 C3D A:HEM1001 4.2 13.4 0.5 CG A:HIS135 4.2 10.9 1.0 C3A A:HEM1001 4.2 12.8 0.5 C2D A:HEM1001 4.2 12.4 0.5 C3D A:HEM1001 4.2 12.6 0.5 C2D A:HEM1001 4.2 11.3 0.5 C2A A:HEM1001 4.2 13.8 0.5 C3A A:HEM1001 4.2 12.8 0.5 C3C A:HEM1001 4.2 9.5 0.5 C2B A:HEM1001 4.2 13.6 0.5 C2C A:HEM1001 4.3 9.3 0.5 C3B A:HEM1001 4.3 13.0 0.5 C2B A:HEM1001 4.3 11.7 0.5 C2C A:HEM1001 4.3 11.6 0.5 C3C A:HEM1001 4.3 12.3 0.5 C3B A:HEM1001 4.3 11.3 0.5

Iron binding site 2 out of 8 in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 within 5.0Å range: probe atom residue distance (Å) B Occ A:Fe1001 b:11.2 occ:0.50 FE A:HEM1001 0.0 11.2 0.5 FE A:HEM1001 0.1 11.0 0.5 ND A:HEM1001 1.9 12.1 0.5 ND A:HEM1001 2.0 11.9 0.5 NA A:HEM1001 2.0 12.1 0.5 NA A:HEM1001 2.0 12.3 0.5 NB A:HEM1001 2.0 11.8 0.5 NE2 A:HIS135 2.1 10.5 1.0 NC A:HEM1001 2.1 11.5 0.5 NC A:HEM1001 2.1 9.8 0.5 NB A:HEM1001 2.1 10.8 0.5 NE2 A:HIS107 2.1 9.6 1.0 C4D A:HEM1001 2.9 12.9 0.5 C1D A:HEM1001 2.9 12.5 0.5 C4D A:HEM1001 3.0 12.6 0.5 C1D A:HEM1001 3.0 10.8 0.5 C4B A:HEM1001 3.0 11.6 0.5 C1B A:HEM1001 3.0 12.6 0.5 CD2 A:HIS107 3.0 10.3 1.0 C1A A:HEM1001 3.0 13.3 0.5 C1A A:HEM1001 3.0 13.0 0.5 CE1 A:HIS135 3.0 11.0 1.0 C4A A:HEM1001 3.0 12.7 0.5 C4A A:HEM1001 3.0 12.0 0.5 C4C A:HEM1001 3.0 11.8 0.5 C4C A:HEM1001 3.1 9.9 0.5 C4B A:HEM1001 3.1 11.0 0.5 C1B A:HEM1001 3.1 11.5 0.5 C1C A:HEM1001 3.1 11.0 0.5 C1C A:HEM1001 3.1 9.6 0.5 CD2 A:HIS135 3.1 11.4 1.0 CE1 A:HIS107 3.1 11.3 1.0 CHA A:HEM1001 3.4 14.1 0.5 CHB A:HEM1001 3.4 12.6 0.5 CHD A:HEM1001 3.4 11.9 0.5 CHA A:HEM1001 3.4 13.8 0.5 CHC A:HEM1001 3.4 11.3 0.5 CHD A:HEM1001 3.4 10.2 0.5 CHB A:HEM1001 3.4 11.5 0.5 CHC A:HEM1001 3.5 11.4 0.5 CG A:HIS107 4.1 10.7 1.0 ND1 A:HIS107 4.1 11.3 1.0 ND1 A:HIS135 4.2 11.7 1.0 C3D A:HEM1001 4.2 13.4 0.5 C2D A:HEM1001 4.2 12.4 0.5 C2B A:HEM1001 4.2 13.6 0.5 CG A:HIS135 4.2 10.9 1.0 C2A A:HEM1001 4.2 13.8 0.5 C3B A:HEM1001 4.2 13.0 0.5 C3A A:HEM1001 4.2 12.8 0.5 C2A A:HEM1001 4.2 13.8 0.5 C3A A:HEM1001 4.2 12.8 0.5 C3D A:HEM1001 4.2 12.6 0.5 C2D A:HEM1001 4.2 11.3 0.5 C3C A:HEM1001 4.2 9.5 0.5 C2C A:HEM1001 4.2 11.6 0.5 C3C A:HEM1001 4.2 12.3 0.5 C2C A:HEM1001 4.2 9.3 0.5 C2B A:HEM1001 4.3 11.7 0.5 C3B A:HEM1001 4.3 11.3 0.5

Iron binding site 3 out of 8 in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 3 of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe1001 b:10.4 occ:0.50 FE B:HEM1001 0.0 10.4 0.5 FE B:HEM1001 0.1 10.6 0.5 ND B:HEM1001 1.9 10.7 0.5 ND B:HEM1001 1.9 11.1 0.5 NA B:HEM1001 2.0 11.1 0.5 NA B:HEM1001 2.0 11.3 0.5 NE2 B:HIS135 2.0 10.5 1.0 NB B:HEM1001 2.1 10.0 0.5 NC B:HEM1001 2.1 9.8 0.5 NB B:HEM1001 2.1 11.0 0.5 NC B:HEM1001 2.1 10.9 0.5 NE2 B:HIS107 2.2 10.0 1.0 C1D B:HEM1001 2.9 9.7 0.5 C4D B:HEM1001 2.9 10.6 0.5 C4D B:HEM1001 3.0 11.8 0.5 CE1 B:HIS135 3.0 11.2 1.0 C1D B:HEM1001 3.0 11.2 0.5 C1A B:HEM1001 3.0 11.1 0.5 C1A B:HEM1001 3.0 12.5 0.5 C1B B:HEM1001 3.0 9.6 0.5 C4B B:HEM1001 3.0 9.9 0.5 C4B B:HEM1001 3.0 11.2 0.5 C4A B:HEM1001 3.0 10.4 0.5 C4A B:HEM1001 3.0 12.2 0.5 C1B B:HEM1001 3.0 11.9 0.5 C4C B:HEM1001 3.0 9.2 0.5 CD2 B:HIS135 3.0 10.3 1.0 CD2 B:HIS107 3.1 8.9 1.0 C1C B:HEM1001 3.1 11.0 0.5 C4C B:HEM1001 3.1 11.6 0.5 C1C B:HEM1001 3.1 9.7 0.5 CE1 B:HIS107 3.1 9.3 1.0 CHA B:HEM1001 3.4 11.6 0.5 CHB B:HEM1001 3.4 11.9 0.5 CHD B:HEM1001 3.4 8.8 0.5 CHA B:HEM1001 3.4 11.6 0.5 CHC B:HEM1001 3.4 10.6 0.5 CHB B:HEM1001 3.4 9.5 0.5 CHC B:HEM1001 3.4 10.6 0.5 CHD B:HEM1001 3.4 11.0 0.5 ND1 B:HIS135 4.1 10.4 1.0 ND1 B:HIS107 4.1 9.2 1.0 CG B:HIS107 4.1 8.5 1.0 CG B:HIS135 4.2 10.7 1.0 C2A B:HEM1001 4.2 11.0 0.5 C2D B:HEM1001 4.2 9.3 0.5 C3A B:HEM1001 4.2 10.1 0.5 C3D B:HEM1001 4.2 10.0 0.5 C2A B:HEM1001 4.2 13.3 0.5 C3A B:HEM1001 4.2 13.0 0.5 C3D B:HEM1001 4.2 11.6 0.5 C2B B:HEM1001 4.2 9.3 0.5 C2D B:HEM1001 4.2 11.5 0.5 C3C B:HEM1001 4.2 9.1 0.5 C2C B:HEM1001 4.2 11.7 0.5 C2B B:HEM1001 4.2 12.2 0.5 C2C B:HEM1001 4.2 9.3 0.5 C3C B:HEM1001 4.3 12.1 0.5 C3B B:HEM1001 4.3 9.3 0.5 C3B B:HEM1001 4.3 12.2 0.5

Iron binding site 4 out of 8 in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 4 of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 within 5.0Å range: probe atom residue distance (Å) B Occ B:Fe1001 b:10.6 occ:0.50 FE B:HEM1001 0.0 10.6 0.5 FE B:HEM1001 0.1 10.4 0.5 ND B:HEM1001 1.9 11.1 0.5 ND B:HEM1001 1.9 10.7 0.5 NA B:HEM1001 2.0 11.3 0.5 NA B:HEM1001 2.0 11.1 0.5 NB B:HEM1001 2.0 11.0 0.5 NC B:HEM1001 2.1 10.9 0.5 NE2 B:HIS107 2.1 10.0 1.0 NB B:HEM1001 2.1 10.0 0.5 NE2 B:HIS135 2.1 10.5 1.0 NC B:HEM1001 2.1 9.8 0.5 C1D B:HEM1001 2.9 11.2 0.5 C4D B:HEM1001 2.9 11.8 0.5 C4D B:HEM1001 3.0 10.6 0.5 C1D B:HEM1001 3.0 9.7 0.5 C4A B:HEM1001 3.0 12.2 0.5 C1B B:HEM1001 3.0 11.9 0.5 C1A B:HEM1001 3.0 12.5 0.5 CD2 B:HIS107 3.0 8.9 1.0 CE1 B:HIS107 3.0 9.3 1.0 C4B B:HEM1001 3.0 11.2 0.5 C1A B:HEM1001 3.0 11.1 0.5 C4C B:HEM1001 3.0 11.6 0.5 C1B B:HEM1001 3.1 9.6 0.5 CE1 B:HIS135 3.1 11.2 1.0 C4B B:HEM1001 3.1 9.9 0.5 C4A B:HEM1001 3.1 10.4 0.5 C1C B:HEM1001 3.1 11.0 0.5 C4C B:HEM1001 3.1 9.2 0.5 CD2 B:HIS135 3.1 10.3 1.0 C1C B:HEM1001 3.1 9.7 0.5 CHB B:HEM1001 3.4 11.9 0.5 CHD B:HEM1001 3.4 11.0 0.5 CHA B:HEM1001 3.4 11.6 0.5 CHA B:HEM1001 3.4 11.6 0.5 CHD B:HEM1001 3.4 8.8 0.5 CHC B:HEM1001 3.4 10.6 0.5 CHC B:HEM1001 3.5 10.6 0.5 CHB B:HEM1001 3.5 9.5 0.5 ND1 B:HIS107 4.1 9.2 1.0 CG B:HIS107 4.1 8.5 1.0 C3A B:HEM1001 4.2 13.0 0.5 ND1 B:HIS135 4.2 10.4 1.0 C2A B:HEM1001 4.2 13.3 0.5 C3D B:HEM1001 4.2 11.6 0.5 C2D B:HEM1001 4.2 11.5 0.5 C2B B:HEM1001 4.2 12.2 0.5 C2A B:HEM1001 4.2 11.0 0.5 C3D B:HEM1001 4.2 10.0 0.5 C2C B:HEM1001 4.2 11.7 0.5 CG B:HIS135 4.2 10.7 1.0 C2D B:HEM1001 4.2 9.3 0.5 C3A B:HEM1001 4.2 10.1 0.5 C3C B:HEM1001 4.2 12.1 0.5 C3B B:HEM1001 4.3 12.2 0.5 C2B B:HEM1001 4.3 9.3 0.5 C3C B:HEM1001 4.3 9.1 0.5 C2C B:HEM1001 4.3 9.3 0.5 C3B B:HEM1001 4.3 9.3 0.5

Iron binding site 5 out of 8 in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 5 of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe1001 b:11.1 occ:0.50 FE C:HEM1001 0.0 11.1 0.5 FE C:HEM1001 0.1 11.3 0.5 ND C:HEM1001 1.9 11.5 0.5 ND C:HEM1001 1.9 10.6 0.5 NA C:HEM1001 2.0 12.1 0.5 NA C:HEM1001 2.0 11.5 0.5 NE2 C:HIS135 2.0 10.8 1.0 NC C:HEM1001 2.1 10.1 0.5 NB C:HEM1001 2.1 11.8 0.5 NC C:HEM1001 2.1 11.3 0.5 NB C:HEM1001 2.1 10.6 0.5 NE2 C:HIS107 2.2 10.2 1.0 C4D C:HEM1001 2.9 12.4 0.5 C1D C:HEM1001 2.9 11.7 0.5 C1D C:HEM1001 2.9 10.1 0.5 C4D C:HEM1001 2.9 11.0 0.5 CE1 C:HIS135 3.0 11.1 1.0 C1A C:HEM1001 3.0 13.0 0.5 C1A C:HEM1001 3.0 12.0 0.5 C4C C:HEM1001 3.0 9.9 0.5 C4A C:HEM1001 3.0 12.9 0.5 C4B C:HEM1001 3.0 12.3 0.5 C4A C:HEM1001 3.0 11.4 0.5 C1B C:HEM1001 3.0 12.8 0.5 C1B C:HEM1001 3.0 10.8 0.5 CD2 C:HIS107 3.0 9.9 1.0 C4C C:HEM1001 3.1 11.8 0.5 C4B C:HEM1001 3.1 10.9 0.5 CD2 C:HIS135 3.1 11.7 1.0 C1C C:HEM1001 3.1 11.7 0.5 C1C C:HEM1001 3.1 10.5 0.5 CE1 C:HIS107 3.1 10.7 1.0 CHA C:HEM1001 3.4 12.3 0.5 CHA C:HEM1001 3.4 12.1 0.5 CHD C:HEM1001 3.4 10.3 0.5 CHD C:HEM1001 3.4 11.7 0.5 CHB C:HEM1001 3.4 13.6 0.5 CHB C:HEM1001 3.4 11.7 0.5 CHC C:HEM1001 3.4 10.9 0.5 CHC C:HEM1001 3.5 11.0 0.5 ND1 C:HIS135 4.1 11.5 1.0 ND1 C:HIS107 4.1 10.9 1.0 CG C:HIS107 4.1 10.4 1.0 C2D C:HEM1001 4.2 12.3 0.5 CG C:HIS135 4.2 12.1 1.0 C3D C:HEM1001 4.2 12.2 0.5 C2A C:HEM1001 4.2 13.6 0.5 C3A C:HEM1001 4.2 13.7 0.5 C2D C:HEM1001 4.2 10.1 0.5 C3A C:HEM1001 4.2 11.7 0.5 C2A C:HEM1001 4.2 12.1 0.5 C3C C:HEM1001 4.2 9.8 0.5 C3D C:HEM1001 4.2 10.4 0.5 C2C C:HEM1001 4.2 12.7 0.5 C3C C:HEM1001 4.2 12.9 0.5 C2C C:HEM1001 4.2 10.0 0.5 C2B C:HEM1001 4.2 13.7 0.5 C2B C:HEM1001 4.3 10.5 0.5 C3B C:HEM1001 4.3 13.8 0.5 C3B C:HEM1001 4.3 10.5 0.5

Iron binding site 6 out of 8 in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 6 of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 within 5.0Å range: probe atom residue distance (Å) B Occ C:Fe1001 b:11.3 occ:0.50 FE C:HEM1001 0.0 11.3 0.5 FE C:HEM1001 0.1 11.1 0.5 ND C:HEM1001 1.9 11.5 0.5 ND C:HEM1001 1.9 10.6 0.5 NA C:HEM1001 2.0 12.1 0.5 NA C:HEM1001 2.0 11.5 0.5 NB C:HEM1001 2.1 11.8 0.5 NC C:HEM1001 2.1 11.3 0.5 NC C:HEM1001 2.1 10.1 0.5 NB C:HEM1001 2.1 10.6 0.5 NE2 C:HIS135 2.1 10.8 1.0 NE2 C:HIS107 2.1 10.2 1.0 C1D C:HEM1001 2.9 11.7 0.5 C4D C:HEM1001 2.9 12.4 0.5 C1D C:HEM1001 2.9 10.1 0.5 C4D C:HEM1001 3.0 11.0 0.5 C1A C:HEM1001 3.0 13.0 0.5 CD2 C:HIS107 3.0 9.9 1.0 C4A C:HEM1001 3.0 12.9 0.5 C1B C:HEM1001 3.0 12.8 0.5 CE1 C:HIS135 3.0 11.1 1.0 C4B C:HEM1001 3.0 12.3 0.5 C4C C:HEM1001 3.0 9.9 0.5 C1A C:HEM1001 3.0 12.0 0.5 C4C C:HEM1001 3.0 11.8 0.5 C1B C:HEM1001 3.0 10.8 0.5 C4A C:HEM1001 3.0 11.4 0.5 CE1 C:HIS107 3.0 10.7 1.0 C4B C:HEM1001 3.1 10.9 0.5 C1C C:HEM1001 3.1 11.7 0.5 C1C C:HEM1001 3.1 10.5 0.5 CD2 C:HIS135 3.1 11.7 1.0 CHD C:HEM1001 3.4 11.7 0.5 CHB C:HEM1001 3.4 13.6 0.5 CHD C:HEM1001 3.4 10.3 0.5 CHA C:HEM1001 3.4 12.1 0.5 CHA C:HEM1001 3.4 12.3 0.5 CHB C:HEM1001 3.4 11.7 0.5 CHC C:HEM1001 3.4 10.9 0.5 CHC C:HEM1001 3.5 11.0 0.5 ND1 C:HIS107 4.1 10.9 1.0 CG C:HIS107 4.1 10.4 1.0 ND1 C:HIS135 4.2 11.5 1.0 C2D C:HEM1001 4.2 12.3 0.5 C3D C:HEM1001 4.2 12.2 0.5 C2A C:HEM1001 4.2 13.6 0.5 C3A C:HEM1001 4.2 13.7 0.5 C3C C:HEM1001 4.2 9.8 0.5 C2D C:HEM1001 4.2 10.1 0.5 C3A C:HEM1001 4.2 11.7 0.5 C2B C:HEM1001 4.2 13.7 0.5 C2A C:HEM1001 4.2 12.1 0.5 C3C C:HEM1001 4.2 12.9 0.5 CG C:HIS135 4.2 12.1 1.0 C2C C:HEM1001 4.2 12.7 0.5 C3D C:HEM1001 4.2 10.4 0.5 C2C C:HEM1001 4.2 10.0 0.5 C3B C:HEM1001 4.3 13.8 0.5 C2B C:HEM1001 4.3 10.5 0.5 C3B C:HEM1001 4.3 10.5 0.5

Iron binding site 7 out of 8 in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 7 of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe1001 b:13.0 occ:0.50 FE D:HEM1001 0.0 13.0 0.5 FE D:HEM1001 0.1 13.3 0.5 ND D:HEM1001 1.9 14.9 0.5 ND D:HEM1001 1.9 13.0 0.5 NA D:HEM1001 2.0 14.0 0.5 NC D:HEM1001 2.0 13.3 0.5 NC D:HEM1001 2.1 12.2 0.5 NA D:HEM1001 2.1 13.3 0.5 NE2 D:HIS135 2.1 13.0 1.0 NB D:HEM1001 2.1 13.3 0.5 NB D:HEM1001 2.1 12.3 0.5 NE2 D:HIS107 2.1 10.9 1.0 C1D D:HEM1001 2.9 15.3 0.5 C1D D:HEM1001 2.9 12.9 0.5 C4D D:HEM1001 2.9 15.7 0.5 C4D D:HEM1001 2.9 14.3 0.5 C4C D:HEM1001 3.0 14.3 0.5 CD2 D:HIS107 3.0 11.5 1.0 C1A D:HEM1001 3.0 14.5 0.5 CE1 D:HIS135 3.0 13.3 1.0 C1C D:HEM1001 3.0 13.6 0.5 C4A D:HEM1001 3.0 14.2 0.5 C4C D:HEM1001 3.0 12.4 0.5 C4B D:HEM1001 3.0 12.7 0.5 C1B D:HEM1001 3.0 13.8 0.5 C4B D:HEM1001 3.0 13.6 0.5 C1B D:HEM1001 3.1 12.7 0.5 C1C D:HEM1001 3.1 13.0 0.5 C1A D:HEM1001 3.1 14.9 0.5 C4A D:HEM1001 3.1 13.2 0.5 CD2 D:HIS135 3.1 13.2 1.0 CE1 D:HIS107 3.1 11.6 1.0 CHD D:HEM1001 3.3 14.6 0.5 CHD D:HEM1001 3.4 11.8 0.5 CHA D:HEM1001 3.4 14.1 0.5 CHC D:HEM1001 3.4 13.3 0.5 CHB D:HEM1001 3.4 13.9 0.5 CHC D:HEM1001 3.4 13.9 0.5 CHA D:HEM1001 3.4 15.4 0.5 CHB D:HEM1001 3.5 12.1 0.5 CG D:HIS107 4.1 11.4 1.0 ND1 D:HIS135 4.1 13.5 1.0 ND1 D:HIS107 4.2 12.4 1.0 C3C D:HEM1001 4.2 15.3 0.5 C2D D:HEM1001 4.2 14.7 0.5 C3D D:HEM1001 4.2 15.6 0.5 C2C D:HEM1001 4.2 15.0 0.5 C3D D:HEM1001 4.2 14.7 0.5 C2D D:HEM1001 4.2 13.3 0.5 C3A D:HEM1001 4.2 14.1 0.5 C2A D:HEM1001 4.2 14.4 0.5 C3C D:HEM1001 4.2 12.9 0.5 CG D:HIS135 4.2 13.8 1.0 C2C D:HEM1001 4.2 13.2 0.5 C2B D:HEM1001 4.3 14.7 0.5 C2B D:HEM1001 4.3 13.2 0.5 C3B D:HEM1001 4.3 14.8 0.5 C2A D:HEM1001 4.3 14.9 0.5 C3A D:HEM1001 4.3 13.8 0.5 C3B D:HEM1001 4.3 12.8 0.5

Iron binding site 8 out of 8 in the Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 8 of Crystal Structure of Hexacoordinated Heme Protein From Anhydrobiotic Tardigrade at pH 4 within 5.0Å range: probe atom residue distance (Å) B Occ D:Fe1001 b:13.3 occ:0.50 FE D:HEM1001 0.0 13.3 0.5 FE D:HEM1001 0.1 13.0 0.5 ND D:HEM1001 1.9 13.0 0.5 ND D:HEM1001 1.9 14.9 0.5 NA D:HEM1001 2.0 14.0 0.5 NA D:HEM1001 2.0 13.3 0.5 NE2 D:HIS135 2.1 13.0 1.0 NC D:HEM1001 2.1 13.3 0.5 NC D:HEM1001 2.1 12.2 0.5 NB D:HEM1001 2.1 12.3 0.5 NE2 D:HIS107 2.1 10.9 1.0 NB D:HEM1001 2.1 13.3 0.5 C1D D:HEM1001 2.9 12.9 0.5 C4D D:HEM1001 2.9 14.3 0.5 C4D D:HEM1001 2.9 15.7 0.5 C1D D:HEM1001 2.9 15.3 0.5 CE1 D:HIS135 3.0 13.3 1.0 C1A D:HEM1001 3.0 14.5 0.5 C4C D:HEM1001 3.0 12.4 0.5 CD2 D:HIS107 3.0 11.5 1.0 C4C D:HEM1001 3.0 14.3 0.5 C1A D:HEM1001 3.0 14.9 0.5 C4A D:HEM1001 3.0 13.2 0.5 C1B D:HEM1001 3.0 12.7 0.5 C4B D:HEM1001 3.0 12.7 0.5 C4A D:HEM1001 3.1 14.2 0.5 C1C D:HEM1001 3.1 13.6 0.5 C1C D:HEM1001 3.1 13.0 0.5 C4B D:HEM1001 3.1 13.6 0.5 C1B D:HEM1001 3.1 13.8 0.5 CD2 D:HIS135 3.1 13.2 1.0 CE1 D:HIS107 3.1 11.6 1.0 CHD D:HEM1001 3.3 11.8 0.5 CHA D:HEM1001 3.3 14.1 0.5 CHD D:HEM1001 3.4 14.6 0.5 CHA D:HEM1001 3.4 15.4 0.5 CHB D:HEM1001 3.4 12.1 0.5 CHC D:HEM1001 3.4 13.3 0.5 CHB D:HEM1001 3.5 13.9 0.5 CHC D:HEM1001 3.5 13.9 0.5 ND1 D:HIS135 4.1 13.5 1.0 C3D D:HEM1001 4.1 14.7 0.5 C2D D:HEM1001 4.1 13.3 0.5 CG D:HIS107 4.2 11.4 1.0 ND1 D:HIS107 4.2 12.4 1.0 C3D D:HEM1001 4.2 15.6 0.5 C2D D:HEM1001 4.2 14.7 0.5 C3C D:HEM1001 4.2 12.9 0.5 CG D:HIS135 4.2 13.8 1.0 C2A D:HEM1001 4.2 14.4 0.5 C3A D:HEM1001 4.2 14.1 0.5 C3C D:HEM1001 4.2 15.3 0.5 C2A D:HEM1001 4.2 14.9 0.5 C3A D:HEM1001 4.2 13.8 0.5 C2C D:HEM1001 4.2 15.0 0.5 C2C D:HEM1001 4.3 13.2 0.5 C2B D:HEM1001 4.3 13.2 0.5 C3B D:HEM1001 4.3 12.8 0.5 C2B D:HEM1001 4.3 14.7 0.5 C3B D:HEM1001 4.3 14.8 0.5

J.Kim, Y.Fukuda, T.Inoue. Crystal Structure of Kumaglobin: A Hexacoordinated Heme Protein From An Anhydrobiotic Tardigrade, Ramazzottius Varieornatus. Febs J. V. 286 1287 2019.
ISSN: ISSN 1742-4658
PubMed: 30506636
DOI: 10.1111/FEBS.14713