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Iron in PDB 6c66: Crispr Rna-Guided Surveillance Complex, Pre-Nicking

Iron Binding Sites:

The binding sites of Iron atom in the Crispr Rna-Guided Surveillance Complex, Pre-Nicking (pdb code 6c66). This binding sites where shown within 5.0 Angstroms radius around Iron atom.
In total 2 binding sites of Iron where determined in the Crispr Rna-Guided Surveillance Complex, Pre-Nicking, PDB code: 6c66:
Jump to Iron binding site number: 1; 2;

Iron binding site 1 out of 2 in 6c66

Go back to Iron Binding Sites List in 6c66
Iron binding site 1 out of 2 in the Crispr Rna-Guided Surveillance Complex, Pre-Nicking


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 1 of Crispr Rna-Guided Surveillance Complex, Pre-Nicking within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Fe1001

b:30.0
occ:1.00
OP1 N:DA21 1.9 38.6 1.0
OD1 G:ASP84 2.0 17.8 1.0
NE2 G:HIS149 2.2 18.6 1.0
OP2 N:DA21 2.4 43.8 1.0
P N:DA21 2.5 38.8 1.0
OD2 G:ASP84 2.6 17.8 1.0
CG G:ASP84 2.6 17.8 1.0
CD2 G:HIS149 2.8 18.6 1.0
FE G:FE1002 3.1 30.0 1.0
CE1 G:HIS149 3.3 18.6 1.0
NE2 G:HIS115 3.4 15.7 1.0
CD2 G:HIS83 3.5 20.8 1.0
OD1 G:ASP215 3.6 30.6 1.0
O5' N:DA21 3.6 33.7 1.0
OD2 G:ASP215 3.7 30.6 1.0
O3' N:DA20 3.7 41.2 1.0
NE2 G:HIS83 3.8 20.8 1.0
CG G:ASP215 3.9 30.6 1.0
CD2 G:HIS115 3.9 15.7 1.0
C3' N:DA20 4.0 35.6 1.0
CG G:HIS149 4.0 18.6 1.0
CB G:ASP84 4.1 17.8 1.0
ND1 G:HIS149 4.2 18.6 1.0
CE G:LYS87 4.5 21.4 1.0
CE1 G:HIS115 4.5 15.7 1.0
NZ G:LYS87 4.6 21.4 1.0
CG G:HIS83 4.7 20.8 1.0
CA G:ASP84 4.8 17.8 1.0
C2' N:DA20 4.8 39.8 1.0

Iron binding site 2 out of 2 in 6c66

Go back to Iron Binding Sites List in 6c66
Iron binding site 2 out of 2 in the Crispr Rna-Guided Surveillance Complex, Pre-Nicking


Mono view


Stereo pair view

A full contact list of Iron with other atoms in the Fe binding site number 2 of Crispr Rna-Guided Surveillance Complex, Pre-Nicking within 5.0Å range:
probe atom residue distance (Å) B Occ
G:Fe1002

b:30.0
occ:1.00
OD2 G:ASP84 1.8 17.8 1.0
OD1 G:ASP215 1.9 30.6 1.0
OP2 N:DA21 2.0 43.8 1.0
NE2 G:HIS83 2.3 20.8 1.0
NE2 G:HIS37 2.4 36.0 1.0
CG G:ASP84 3.0 17.8 1.0
CG G:ASP215 3.1 30.6 1.0
FE G:FE1001 3.1 30.0 1.0
CD2 G:HIS37 3.1 36.0 1.0
CD2 G:HIS83 3.2 20.8 1.0
P N:DA21 3.3 38.8 1.0
CE1 G:HIS83 3.3 20.8 1.0
CE1 G:HIS37 3.4 36.0 1.0
OD2 G:ASP215 3.6 30.6 1.0
OD1 G:ASP84 3.7 17.8 1.0
O5' N:DA21 3.8 33.7 1.0
OP1 N:DA21 4.0 38.6 1.0
CB G:ASP84 4.1 17.8 1.0
CB G:ASP215 4.3 30.6 1.0
CG G:HIS37 4.3 36.0 1.0
ND1 G:HIS37 4.4 36.0 1.0
CG G:HIS83 4.4 20.8 1.0
ND1 G:HIS83 4.4 20.8 1.0
O3' N:DA20 4.5 41.2 1.0
CE G:LYS87 4.8 21.4 1.0
CA G:ASP215 4.9 30.6 1.0

Reference:

Y.Xiao, M.Luo, A.E.Dolan, M.Liao, A.Ke. Structure Basis For Rna-Guided Dna Degradation By Cascade and CAS3. Science V. 361 2018.
ISSN: ESSN 1095-9203
PubMed: 29880725
DOI: 10.1126/SCIENCE.AAT0839
Page generated: Tue Aug 6 14:50:45 2024

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